Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq5375 111 2e-19 >seq5375 Length=21980 Score = 111 bits (122), Expect = 2e-19 Identities = 138/189 (73%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 146985 AAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGG 147044 |||||| || |||||||||| ||| || || |||| | || ||||| || ||||| || Sbjct 1123 AAGGCCAGTGACGTGGGCCATCATATATGTTAGCAAGGCATAACTGGCGATATTGAAAGG 1182 Query 147045 GACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGC 147104 ||||| | |||||| || | || | ||| |||| ||||| || ||||| |||| ||| Sbjct 1183 CACCCCTAAGCCCATATCAGCTGAACGCTGATACATTTGGCATGAAAGCTCGCCGTTGGC 1242 Query 147105 CACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGG 147164 ||| |||||||| ||| |||||| || || || ||||| ||| | | | || Sbjct 1243 CACATAAAACTGCGCTAGGCAGTGGCAAGGAGGAAGTGCCATTTGGGGTAAGGCGCAAGG 1302 Query 147165 GTTCCAGGC 147173 ||||||||| Sbjct 1303 GTTCCAGGC 1311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583045796325600