Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= NC_027382.1 Length=37146 Score E Sequences producing significant alignments: (Bits) Value seq9686 179 9e-41 >seq9686 Length=37809 Score = 179 bits (198), Expect = 9e-41 Identities = 391/580 (67%), Gaps = 4/580 (1%) Strand=Plus/Plus Query 35485 ATGGCATGATTTCCGC-TTTTAAACGGGGAATTCAGCGTGCTGATTGGCTATGTAAGGGT 35543 |||||||||| | || |||| || || ||| | |||||||||||||||| | || Sbjct 27123 ATGGCATGATCACGGCCTTTTGAAGGGTGAAAACCAA-TGCTGATTGGCTATGTTCGCGT 27181 Query 35544 ATCAACAAATGACCAGAATACAGACCTGCAACGAAACGCTCTTGTTTGTGCAGGATGTGA 35603 |||||||||||||||||| || | | ||||| || || || | | ||||| ||||| Sbjct 27182 ATCAACAAATGACCAGAACACCGCATTACAACGGAATGCGCTGGAGAGCGCAGGTTGTGA 27241 Query 35604 ACAAATATTTGAAGATAAATTAAGCGGAACAAGGACAGACAGACCTGGATTAAAACGCG- 35662 | ||| ||||||||||| | || || | || | | ||| | || || | || || | Sbjct 27242 GCTAATTTTTGAAGATAAGATCAGTGGCAAAACGTCTGACCGCCCAGGGCTTAAGCGTGT 27301 Query 35663 CTTTAAAGCGTCTTCAAAAAGGTGACACACTGGTTGTCTGGAAACTGGATCGCCTCGGGC 35722 | | | || || |||| || || ||||| || ||||| |||| || || || | Sbjct 27302 GCTCAGAACG-CTAGGGGAAGGAGATACGCTGGTGGTTTGGAAGTTGGACCGGCTGGGAC 27360 Query 35723 GAAGCATGAAACATTTGATTTCTCTCGTAGGGGAATTACGAGAGCGAGGGATTAATTTTC 35782 | |||||| |||| | | ||||| | ||| | || || |||||||||| |||| Sbjct 27361 GCAGCATGCGACATCTTGTCGTGCTCGTGGAAGAACTGCGTGATAGAGGGATTAACTTTC 27420 Query 35783 GCAGTCTTACTGACAGTATTGATACGTCATCTCCAATGGGGCGTTTTTTCTTCCACGTTA 35842 | || || || ||||| |||||||| | || |||||||| || || ||||| || | Sbjct 27421 GGAGCCTGACAGACAGCATTGATACCAGTACGCCGATGGGGCGGTTCTTTTTCCATGTAA 27480 Query 35843 TGGGTGCCCTGGCTGAGATGGAACGAGAACTAATCATCGAGAGAACGATGGCTGGACTTG 35902 |||| || ||||| |||||||| ||||| || || |||| |||| ||||| | | Sbjct 27481 TGGGCGCACTGGCCGAGATGGAGCGAGAGCTGATAGTCGAACGAACCCGCGCTGGTTTAG 27540 Query 35903 CTGCTGCCAGAAATAAAGGCCGTATCGGTGGGCGACCACCTAAACTAACCAAAGCGGAAT 35962 | ||||| | | || | || || || ||| || ||| | | |||| || | Sbjct 27541 CAGCTGCACGCGCAGAGGGTAGGATTGGAGGCAGACGCCCAAAATATAGCGAAGCTGAGT 27600 Query 35963 GGGAGCAGGCCGGGCGTTTATTAGCACAAGGAATCCCCCGCAAGCAGGTCGCATTGATCT 36022 ||| ||| || | || ||| | ||||| | |||||||| ||| | |||| Sbjct 27601 GGGCTCAGATGGGAAGGTTGATAGAAGGGGGAATGGATAGAAAGCAGGTGGCAATCATCT 27660 Query 36023 ACGATGTGGCCCTGTCAACGCTGTATAAAAAACACCCCGC 36062 | ||||| | | || || ||||| || ||| ||||| Sbjct 27661 ATGATGTCGGGGTATCTACTCTGTACAAGAAATTTCCCGC 27700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 118660106804584