Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq5580 91.5 5e-13 >seq5580 Length=7482 Score = 91.5 bits (100), Expect = 5e-13 Identities = 121/167 (72%), Gaps = 1/167 (1%) Strand=Plus/Minus Query 443706 GAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTC 443765 |||||| | |||| ||||| | ||||| || | || || ||| |||| ||||| Sbjct 5777 GAGCGAGTCATCGCCTTTGCAGCCGTCGAGGGTATTTTTTTCTCTGGCT-CTTTTGCCTC 5719 Query 443766 CATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGAT 443825 ||| |||||| |||| ||| | || | |||| |||||| || ||| ||||| || || Sbjct 5718 CATTTTCTGGCTGAAGAAGAGAGGTTTGATGCCCGGTCTTACTTTTTCCAACGAGCTCAT 5659 Query 443826 CAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACA 443872 || |||||||||||||||||||| || || || ||| | |||| Sbjct 5658 TTCGCGTGACGAGGGTTTGCATTGCGATTTTGCTTGCCTTATGTACA 5612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1587102166200905