Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26]
60,629 sequences; 109,181,683 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq1628 318 2e-81
seq6222 181 3e-40
seq7016 168 2e-36
seq5580 116 1e-20
seq7774 95.1 4e-14
seq31002 89.7 2e-12
seq12440 89.7 2e-12
seq12439 89.7 2e-12
seq5172 89.7 2e-12
seq26419 87.8 5e-12
seq16930 87.8 5e-12
seq6384 87.8 5e-12
>seq1628
Length=19996
Score = 318 bits (352), Expect = 2e-81
Identities = 956/1461 (65%), Gaps = 41/1461 (3%)
Strand=Plus/Plus
Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258
|| || || || || || ||||| || || ||||| || | ||| | || | |
Sbjct 17554 GCAATTGGTATTGACTTGGGTACCACCTACTCTTGCGTGGGTGTATTCCAGCACGGCAAA 17613
Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318
|||||||| ||||| || || || |||||| | || || ||||| ||||| || |||||
Sbjct 17614 GTAGAAATCATTGCCAACGACCAGGGTAACCGTACCACTCCATCCTACGTCGCCTTTACG 17673
Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378
|| || |||||| | || || ||| ||||||||||||||| || || || ||
Sbjct 17674 GACACGGAGCGTCTCATCGGCGATGCTGCAAAAAATCAAGTCGCGATGAACCCTTCCAAC 17733
Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCT 349438
|| || |||||||| || || ||||| || | | || |||| | ||| ||
Sbjct 17734 ACCGTCTTTGATGCGAAACGTCTTATCGGCCGTCGATTCGATGACGCCACCGTGCAAGCT 17793
Query 349439 GATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATA---AACCAATTATT 349495
||| | || || | || || | || | ||| || | ||| |||| | |||
Sbjct 17794 GATATGAAGCACTGGCCGTTCAAAGTCAT--CAA----CGATAATACCAAACCCAAGATT 17847
Query 349496 GAGGTTGAATATAAAGGTGA-ACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGT 349554
| || || || || ||||| || ||| | || || ||||||||||| || || |||||
Sbjct 17848 CAAGTCGAGTACAAGGGTGAGACCAAAGCC-TTCTTCCCCGAAGAAATCTCGTCCATGGT 17906
Query 349555 TTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGT 349614
| | || || ||| |||| || ||||| || || || | ||| | ||||| ||
Sbjct 17907 TCTGGTAAAGATGCGAGAAACGGCAGAAGCTTACTTGGGCAGCAAAGTCTCCGATGCCGT 17966
Query 349615 TATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAG 349674
| || || || ||||| || || ||| |||||||| || || || || ||||| |
Sbjct 17967 CGTCACGGTCCCCGCCTACTTCAACGATTCCCAGCGTCAAGCCACCAAGGACGCTGGTAC 18026
Query 349675 CATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATA 349734
||| ||||| || || ||| | | || || || || || || |||||||| || || ||
Sbjct 18027 CATCGCGGGCTTGAACGTTTTGCGTATCATCAACGAGCCTACCGCTGCAGCTATCGCCTA 18086
Query 349735 TGGGCTTG---ATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGG 349791
||| | | | ||| || ||| ||| || || || || ||||| || || ||
Sbjct 18087 TGGTTTGGACAAGAAAGTGGGTG---GTGAACGGAACATCCTCATCTTTGACTTGGGCGG 18143
Query 349792 TGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAAC 349851
||| ||||||||||| || | || || ||||||| || || || ||||| ||| | ||
Sbjct 18144 TGGAACTTTTGATGTCTCCATTCTCACCATTGAAGAAGGCATCTTCGAAGTCAAATCCAC 18203
Query 349852 TGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGT 349911
|| |||||||| || | ||||| ||||||||||| || || | || || || ||
Sbjct 18204 CGCGGGTGATACTCACTTGGGTGGTGAAGATTTTGACAACCGCATGGTCAATCACTTCGT 18263
Query 349912 TAAAGAATTTAAGCGTCAAGCTAAAATTGATA-TTGGAGA-TAATCCTAGAGCAATGCGT 349969
||||||| || || |||| || || | | ||| | |||||| | || ||||
Sbjct 18264 CCAAGAATTCAAACG-CAAG-TACAAGAAAGACTTGTCCACCAATCCTCGCGCTCTGCGA 18321
Query 349970 CGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCT 350029
|| || | || || || ||||| || ||||| | | || || | |||||| | ||
Sbjct 18322 CGTCTCCGTACGGCTTGCGAACGGGCCAAGCGGACTCTGTCGTCCTCCACCCAAGCTTCG 18381
Query 350030 ATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGG 350089
| ||||| || || || || || | || || | | || ||||| || || ||
Sbjct 18382 GTCGAAATCGACTCGCTGTTCGAAGGTATCGACTTTTACACTTCGATTACCCGCGCCCGT 18441
Query 350090 TTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTA 350149
|| ||||| | || || || || | || || ||||||||||| || |||| ||
Sbjct 18442 TTCGAAGAGCTTTGCGCCGACCTCTTCCGCGCCACCATGGATCCTGTTGAGAAAGCCTTG 18501
Query 350150 AAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACA 350209
|| || || | |||| ||| | ||| | ||||| || ||||| || ||
Sbjct 18502 CGCGACGCCAAGCTTGACAAAGCCTCGATCAACGAAATTGTTTTGGTCGGTGGCTCCACG 18561
Query 350210 CGTATTCCAAAAGTTC---AACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCT 350266
||||| || ||||| | ||| ||| | | || ||||| || ||||||||||
Sbjct 18562 CGTATCCCGAAAGTGCAGAAACTGTTGCAA---GATTTTTTCAACGGCAAAGAACTGAAC 18618
Query 350267 AGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTA 350326
| || || || || || ||||||||||| || ||||| || || || || | |||||
Sbjct 18619 AAGTCCATCAACCCGGACGAAGCTGTTGCTTACGGTGCCGCCGTCCAAGCCGCCATTTTG 18678
Query 350327 TCTGG----AAAT---AAGAGTTCTAAAATTGATGATCTATTACTACTAGATGTAACTCC 350379
|| |||| ||| | || || ||| || || || || || || | ||
Sbjct 18679 CACGGAGACAAATCCGAAGCGGTCCAAGATT--TGCTC-----CTGCTCGACGTCGCCCC 18731
Query 350380 ACTTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAG 350439
|||||| | || | || || |||| | || ||||| | ||| | ||||
Sbjct 18732 TCTTTCGTTGGGTATCGAGACCGCTGGCGGTGTTATGACCCCCTTGATTAAGCGTAATAC 18791
Query 350440 TACTGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGT 350499
|| | || || || || |||| ||||| | || | ||| || || ||||| | ||
Sbjct 18792 CACCATCCCGACCAAGCAGACCCAGACTTTCACAACGTATGCCGACAACCAGCCCGGCGT 18851
Query 350500 AACAATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGA 350559
|||||||||| ||||| ||||| || || ||||| || || | || |
Sbjct 18852 CTTGATTCAAGTATACGAAGGGGAACGCGCCATGACAAAAGACAACAACTTGTTGGGCAA 18911
Query 350560 ATTTACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTT 350619
|| || | | ||||| || || ||||||||||||||||||||||| | ||
Sbjct 18912 GTTCGAACTCACCGGTATTCCGCCTGCTCCGCGAGGAGTTCCTCAGATTGAAGTCACCTT 18971
Query 350620 CGATATTGATTCAAATGGTAT 350640
|||||| || | || |||||
Sbjct 18972 CGATATCGACGCCAACGGTAT 18992
Score = 116 bits (128), Expect = 1e-20
Identities = 359/550 (65%), Gaps = 4/550 (1%)
Strand=Plus/Minus
Query 183243 AAAATTGCAGCTTGAACAGCTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGA 183302
||||| || ||||| || || ||||| || ||||||||||| || ||||| || || |
Sbjct 18677 AAAATGGCGGCTTGGACGGCGGCACCGTAAGCAACAGCTTCGTCCGGGTTGATGGA-CTT 18619
Query 183303 GATAA-TTCTTTGCCATTAAAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGT 183361
| | | ||||||||| || ||||| ||| | || || || | ||| || || | ||
Sbjct 18618 GTTCAGTTCTTTGCCGTTGAAAAAATCTTGCAACAGTTTCTGCACTTTCGGGATACGCGT 18559
Query 183362 TGAACCACCGACTAATACTACTTCATCGATATTA-CTTTTACTAATTTGTGAATCTTTTA 183420
|| |||||||| || || | ||| | ||| |||| | | ||| | || |
Sbjct 18558 GGAGCCACCGACCAAAACAATTTCGTTGATCGAGGCTTTGTCAAGCTTG-GCGTCGCGCA 18500
Query 183421 AAACTTTTTCAACAGGGTCCATAGTTTTTCTAAATAAATCTATACATAACTCTTCTAATC 183480
| |||| |||||||| ||||| || | || | || || | |||||| || |
Sbjct 18499 AGGCTTTCTCAACAGGATCCATGGTGGCGCGGAAGAGGTCGGCGCAAAGCTCTTCGAAAC 18440
Query 183481 TTGCTCTAGTTAAAGATGaaaaaaaGTCAATACCATTATATAAGGAATCAATTTCAATCG 183540
|| | || | || | ||||||| ||||| | | | || || ||||| | ||
Sbjct 18439 GGGCGCGGGTAATCGAAGTGTAAAAGTCGATACCTTCGAACAGCGAGTCGATTTCGACCG 18380
Query 183541 ATGTTTGTGTAGATGATGATAATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGAC 183600
| | ||| || || || || | || | || || ||||| || || || | || || |
Sbjct 18379 AAGCTTGGGTGGAGGACGACAGAGTCCGCTTGGCCCGTTCGCAAGCCGTACGGAGACGTC 18320
Query 183601 GTAATGATCTTGGATTATCTGTAATATCTTGTTTATGTTTTCTTTTAAATTCAGTAATAA 183660
| | | | ||||| | | |||| || | || | ||| ||||| | |
Sbjct 18319 GCAGAGCGCGAGGATTGGTGGACAAGTCTTTCTTGTACTTGCGTTTGAATTCTTGGACGA 18260
Query 183661 AATGTTGAAGTAATCTTGTATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAG 183720
| || | | | | | ||||||||||||||||| || || ||||| || || || |
Sbjct 18259 AGTGATTGACCATGCGGTTGTCAAAATCTTCACCACCCAAGTGAGTATCACCCGCGGTGG 18200
Query 183721 CTTTAACTTCAAATATTCCGTCTTCAATATTTAAAATTGATACATCAAATGTACCACCAC 183780
||| ||||| || || || |||||||| | | ||| || |||||||| || ||||| |
Sbjct 18199 ATTTGACTTCGAAGATGCCTTCTTCAATGGTGAGAATGGAGACATCAAAAGTTCCACCGC 18140
Query 183781 CCAAATCAAA 183790
|||| |||||
Sbjct 18139 CCAAGTCAAA 18130
>seq6222
Length=12937
Score = 181 bits (200), Expect = 3e-40
Identities = 181/235 (77%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| |||||||||||| | | || || |||||||||||||| ||||| || || || |
Sbjct 3958 TTTGCATACCACCACGCAGACGCAGGACTAGATGAAGAGTAGATTCTTTCTGGATGTTGT 4017
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| || || || || || |||||||| | || || || ||||| || | |||||| ||||
Sbjct 4018 AGTCGGACAAAGTGCGACCATCTTCTAACTGCTTGCCGGCAAAAATCAAACGTTGTTGAT 4077
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
| |||||||| ||||| || || || |||||||| || || || ||||| | || ||||
Sbjct 4078 CGGGAGGAATGCCTTCCTTGTCTTGGATTTTAGCCTTGACGTTCTCAATGGTGTCTGATG 4137
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|||| ||||| | || | ||||| || || || ||||||||||||||||||||
Sbjct 4138 GTTCGACTTCCAAAGTGATCGTCTTGCCAGTGAGGGTTTTTACAAAAATCTGCAT 4192
Score = 176 bits (194), Expect = 1e-38
Identities = 180/235 (77%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| |||||| ||||| | | || || | ||| || ||||| || |||||||| || |
Sbjct 4642 TTTGCATACCGCCACGGAGACGGAGGACCAAATGGAGTGTAGATTCCTTTTGAATGTTGT 4701
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| ||||| | || || || ||||| | |||||| || || || |||| |||||| ||||
Sbjct 4702 AGTCAGACAGGGTACGACCGTCTTCCAATTGTTTGCCGGCGAAAATTAAACGTTGTTGAT 4761
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
|||||||||| ||||||||||| |||||||| ||||| || || ||||| | || || |
Sbjct 4762 CAGGAGGAATGCCTTCTTTATCTTGAATTTTGGCTTTGACGTTCTCAATAGTGTCGGAAG 4821
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|||| ||||| | || | |||||||| || || ||||| || ||||| |||||
Sbjct 4822 GTTCGACTTCCAAAGTGATCGTCTTTCCCGTGAGAGTTTTGACGAAAATTTGCAT 4876
Score = 174 bits (192), Expect = 5e-38
Identities = 177/231 (77%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||| || || || | |||||| | ||||| || || |||||||| ||||| |||||
Sbjct 4190 CATACCGCCTCGCAAACGTAGAACCAAGTGAAGGGTGGATTCTTTTTGGATATTGTAATC 4249
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|||||| || || || ||||| | ||||| ||||| ||||||| ||||| ||||| ||
Sbjct 4250 AGATAAGGTACGACCGTCTTCCAACTGTTTGCCAGCGAAGATTAATCGTTGTTGATCGGG 4309
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
||||| |||||||| || || ||||| ||||| || || ||||| | ||||| || ||
Sbjct 4310 GGGAATGCCTTCTTTGTCTTGGATTTTGGCTTTGACGTTTTCAATGGTGTCAGAGGGCTC 4369
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||||| | || | || || ||||| || || || || |||||||||||
Sbjct 4370 GACTTCCAAAGTGATGGTTTTGCCGGTAAGAGTCTTCACGAAAATCTGCAT 4420
Score = 145 bits (160), Expect = 2e-29
Identities = 160/212 (75%), Gaps = 1/212 (0%)
Strand=Plus/Plus
Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585
||| ||| ||| ||||| || || || || |||||||| || || || || || ||||||
Sbjct 3754 AGACCAA-ATGGAGAGTTGATTCCTTCTGGATATTATAGTCGGACAAGGTACGACCATCT 3812
Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645
|| | ||| || || || ||||| | |||||||||||| |||||||| ||||| || ||
Sbjct 3813 TCCAATTGCTTACCGGCGAAGATCAAACGTTGCTGATCGGGAGGAATACCTTCCTTGTCT 3872
Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705
|||||||| ||||| || || ||||| | || || ||||||||||| | || | ||
Sbjct 3873 TGAATTTTGGCTTTGACGTTTTCAATGGTGTCGGACGGTTCAACTTCCAAGGTGATGGTT 3932
Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || || | ||||| || || || |||||
Sbjct 3933 TTGCCCGTCAAGGTTTTCACGAAGATTTGCAT 3964
>seq7016
Length=12204
Score = 168 bits (186), Expect = 2e-36
Identities = 370/551 (67%), Gaps = 5/551 (1%)
Strand=Plus/Plus
Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258
||||| || || ||||| ||||| || || || ||||| | ||| | ||| |||
Sbjct 5344 GCTATTGGCATTGATTTGGGTACCACCTACTCCTGTGTGGGTGTATTCCAACATGGCAAA 5403
Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318
|| ||||| ||||| || || ||||||||| | || || || || ||||| || || |||
Sbjct 5404 GTGGAAATTATTGCCAACGACCAAGGTAACCGCACGACACCTTCTTACGTGGCTTTCACC 5463
Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378
|| || |||||| |||| || || | || || || || | || || || | ||
Sbjct 5464 GACACCGAGCGTCTGATCGGCGACGCCGCCAAGAACCAGGTCGCCATGAACCCGACCAAC 5523
Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCT 349438
|| || |||||||||||||| || || ||| | |||| ||| | | || ||
Sbjct 5524 ACCGTCTTTGATGCTAAGCGTCTCATCGGTCGTCGTTTCGAGGACGCAACCGTCCAGTCC 5583
Query 349439 GATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAG 349498
|| | || || | || || || | | || || | || || | || |
Sbjct 5584 GACATGAAGCACTGGCCCTTCGAAGTCATC---AGCGATGGCGGCAAGCCTAAAATCCAA 5640
Query 349499 GTTGAATATAAAGGTGAA-CAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTT 349557
|| |||| || || ||| | ||||| || || || |||||| |||| || ||||| |
Sbjct 5641 GTCGAATTCAAGGGAGAAACCAAAACC-TTCTTCCCTGAAGAAGTTTCCTCCATGGTCCT 5699
Query 349558 AGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTAT 349617
||||||||||||| ||||||||| ||||| || |||| || || | || || |
Sbjct 5700 CACCAAAATGAAGGAAACTGCTGAAGCTTATTTGGGACAAACTGTCACCAACGCCGTCGT 5759
Query 349618 TACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCAT 349677
|| || || || || || || ||| |||||||| || ||||| || || || | |||
Sbjct 5760 CACAGTCCCCGCTTACTTCAACGATTCCCAGCGTCAAGCTACAAAGGACGCCGGTACCAT 5819
Query 349678 TGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGG 349737
|| || || || || || | || || || |||||||| ||||| || ||||| || ||
Sbjct 5820 CGCTGGCTTGAACGTCCTGCGTATCATCAACGAACCCACAGCTGCCGCTATTGCCTACGG 5879
Query 349738 GCTTGATAAAA 349748
| || ||||
Sbjct 5880 TTTGGACAAAA 5890
>seq5580
Length=7482
Score = 116 bits (128), Expect = 1e-20
Identities = 229/339 (68%), Gaps = 0/339 (0%)
Strand=Plus/Plus
Query 223702 AGCAAATTCTGTATGTAATGCCTCATCTCTTGATATTAATTCATTTGAAAATGTTAATCC 223761
|||||| || ||| || |||| || | || || | || || ||||| || | ||
Sbjct 5625 AGCAAAATCGCAATGCAAACCCTCGTCACGCGAAATGAGCTCGTTGGAAAAAGTAAGACC 5684
Query 223762 AGGCATTAAACCTCTCTTTTTCATCCAAAATATTGCGCAAAAAGCTCCTGaaaaaaaTAT 223821
||||| ||||||||||| |||| ||| || || | | ||||| || || ||||| ||
Sbjct 5685 GGGCATCAAACCTCTCTTCTTCAGCCAGAAAATGGAGGCAAAAGAGCCAGAGAAAAAAAT 5744
Query 223822 ACCTTCTACACAAGCAAACGCTACTAATCGTGTTGCAAAATTTGAATCTTTGTCTCCTAT 223881
||| || || ||||| || | | ||| |||||| || ||||| ||
Sbjct 5745 ACCCTCGACGGCTGCAAAGGCGATGACTCGCTCAGCAAAACCTGCTGTGTTGTCAGAGAT 5804
Query 223882 CCATTTTAATGCCCAATCTGCTTTTTTCTTAATACAAGAAAAATTTTCTAAAGCATTAAA 223941
|||||| || |||||||| || || ||||| | ||||| || |||| | ||| ||
Sbjct 5805 CCATTTAAAGGCCCAATCGGCCTTCTTCTTTACACAAGGAAGGGTTTCGATAGCTCGGAA 5864
Query 223942 CAACTTCGATTTCTCATTATGATCACTTATATATGTTTCTATTAATTGACTATACATTAT 224001
|| | || |||||||| | || | ||||| || || ||||| | |||||||
Sbjct 5865 CAGCATCTGTTTCTCATCAGGAGATCGGATATAAGTGTCGATTAAAAGTGAATACATTTC 5924
Query 224002 TGAATGTATATTTTCCATTGCTATTTGAAATCCATAAAA 224040
||||| || |||||||| || || || || || || ||
Sbjct 5925 GGAATGAATGTTTTCCATGGCAATCTGGAAGCCGTAGAA 5963
>seq7774
Length=19145
Score = 95.1 bits (104), Expect = 4e-14
Identities = 137/188 (73%), Gaps = 8/188 (4%)
Strand=Plus/Minus
Query 377402 ATACGGTACAAGAAGGATTTTTTGGATTTTCA--GATAATGATAATATTTCTTCAATGCG 377459
|||| || | || ||| ||| || |||| | ||| ||||||| | | ||||| ||
Sbjct 16217 ATACAGTCAAGGAGGGAGCTTTCGGGTTTTTACTGATGTTGATAATTTCT-TTCAAA-CG 16160
Query 377460 TGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTAAG 377519
||||||||| | || || ||| || || | ||||||||||| |||||||| || ||
Sbjct 16159 AGGCACACCAAGCGTTACGTTC---TTTGAAGACACACCAGCAAAATGGAAAGTGTTCAG 16103
Query 377520 AGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCTCC 377579
|| | ||||| | ||||||||| | ||||| || || | | | || |||||||||||
Sbjct 16102 TGTCATCTGAGTGGCGGGCTCACCCAAAGACTGTGCGGCCAAAGCTCCCACCATTTCTCC 16043
Query 377580 AGGATTGA 377587
||| ||||
Sbjct 16042 AGG-TTGA 16036
>seq31002
Length=509
Score = 89.7 bits (98), Expect = 2e-12
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949
|||| ||||| |||| ||||||| ||||||||| |||||||||||| || |||||| | |
Sbjct 350 GGGGGTGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGCGAGAGGCACGGGGATCGATA 291
Query 235950 CCCAGCATCTCCAT 235963
||| ||||||||||
Sbjct 290 CCCCGCATCTCCAT 277
>seq12440
Length=1014
Score = 89.7 bits (98), Expect = 2e-12
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949
|||| ||||| |||| ||||||| ||||||||| |||||||||||| || |||||| | |
Sbjct 857 GGGGGTGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGCGAGAGGCACGGGGATCGATA 798
Query 235950 CCCAGCATCTCCAT 235963
||| ||||||||||
Sbjct 797 CCCCGCATCTCCAT 784
>seq12439
Length=8123
Score = 89.7 bits (98), Expect = 2e-12
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949
|||| ||||| |||| ||||||| ||||||||| |||||||||||| || |||||| | |
Sbjct 407 GGGGGTGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGCGAGAGGCACGGGGATCGATA 348
Query 235950 CCCAGCATCTCCAT 235963
||| ||||||||||
Sbjct 347 CCCCGCATCTCCAT 334
Score = 87.8 bits (96), Expect = 5e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949
|||| ||||| |||| ||||||| ||||||||| |||||||||||| || |||||| | |
Sbjct 240 GGGGGTGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGCGAGAGGCACGGGGATCGATA 181
Query 235950 CCCAGCATCTCCA 235962
||| |||||||||
Sbjct 180 CCCCGCATCTCCA 168
>seq5172
Length=19112
Score = 89.7 bits (98), Expect = 2e-12
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949
|||| ||||| |||| ||||||| ||||||||| |||||||||||| || |||||| | |
Sbjct 9134 GGGGGTGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGCGAGAGGCACGGGGATCGATA 9075
Query 235950 CCCAGCATCTCCAT 235963
||| ||||||||||
Sbjct 9074 CCCCGCATCTCCAT 9061
>seq26419
Length=673
Score = 87.8 bits (96), Expect = 5e-12
Identities = 67/78 (86%), Gaps = 1/78 (1%)
Strand=Plus/Minus
Query 235885 TATAGGGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGAT 235944
|| |||||| ||||| |||| ||||||| ||||||||| |||||||||||| || |||||
Sbjct 351 TACAGGGGG-TGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGCGAGAGGCACGGGGAT 293
Query 235945 CAAAACCCAGCATCTCCA 235962
| | |||| |||||||||
Sbjct 292 CGATACCCCGCATCTCCA 275
>seq16930
Length=12865
Score = 87.8 bits (96), Expect = 5e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949
|||| ||||| |||| ||||||| ||||||||| |||||||||||| || |||||| | |
Sbjct 11877 GGGGGTGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGCGAGAGGCACGGGGATCGATA 11818
Query 235950 CCCAGCATCTCCA 235962
||| |||||||||
Sbjct 11817 CCCCGCATCTCCA 11805
>seq6384
Length=7592
Score = 87.8 bits (96), Expect = 5e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949
|||| ||||| |||| ||||||| ||||||||| |||||||||||| || |||||| | |
Sbjct 7279 GGGGGTGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGCGAGAGGCACGGGGATCGATA 7220
Query 235950 CCCAGCATCTCCA 235962
||| |||||||||
Sbjct 7219 CCCCGCATCTCCA 7207
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1514077336650087
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |