Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq1628 318 2e-81 seq6222 181 3e-40 seq7016 168 2e-36 seq5580 116 1e-20 seq7774 95.1 4e-14 seq31002 89.7 2e-12 seq12440 89.7 2e-12 seq12439 89.7 2e-12 seq5172 89.7 2e-12 seq26419 87.8 5e-12 seq16930 87.8 5e-12 seq6384 87.8 5e-12 >seq1628 Length=19996 Score = 318 bits (352), Expect = 2e-81 Identities = 956/1461 (65%), Gaps = 41/1461 (3%) Strand=Plus/Plus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 || || || || || || ||||| || || ||||| || | ||| | || | | Sbjct 17554 GCAATTGGTATTGACTTGGGTACCACCTACTCTTGCGTGGGTGTATTCCAGCACGGCAAA 17613 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 |||||||| ||||| || || || |||||| | || || ||||| ||||| || ||||| Sbjct 17614 GTAGAAATCATTGCCAACGACCAGGGTAACCGTACCACTCCATCCTACGTCGCCTTTACG 17673 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || |||||| | || || ||| ||||||||||||||| || || || || Sbjct 17674 GACACGGAGCGTCTCATCGGCGATGCTGCAAAAAATCAAGTCGCGATGAACCCTTCCAAC 17733 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCT 349438 || || |||||||| || || ||||| || | | || |||| | ||| || Sbjct 17734 ACCGTCTTTGATGCGAAACGTCTTATCGGCCGTCGATTCGATGACGCCACCGTGCAAGCT 17793 Query 349439 GATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATA---AACCAATTATT 349495 ||| | || || | || || | || | ||| || | ||| |||| | ||| Sbjct 17794 GATATGAAGCACTGGCCGTTCAAAGTCAT--CAA----CGATAATACCAAACCCAAGATT 17847 Query 349496 GAGGTTGAATATAAAGGTGA-ACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGT 349554 | || || || || ||||| || ||| | || || ||||||||||| || || ||||| Sbjct 17848 CAAGTCGAGTACAAGGGTGAGACCAAAGCC-TTCTTCCCCGAAGAAATCTCGTCCATGGT 17906 Query 349555 TTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGT 349614 | | || || ||| |||| || ||||| || || || | ||| | ||||| || Sbjct 17907 TCTGGTAAAGATGCGAGAAACGGCAGAAGCTTACTTGGGCAGCAAAGTCTCCGATGCCGT 17966 Query 349615 TATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAG 349674 | || || || ||||| || || ||| |||||||| || || || || ||||| | Sbjct 17967 CGTCACGGTCCCCGCCTACTTCAACGATTCCCAGCGTCAAGCCACCAAGGACGCTGGTAC 18026 Query 349675 CATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATA 349734 ||| ||||| || || ||| | | || || || || || || |||||||| || || || Sbjct 18027 CATCGCGGGCTTGAACGTTTTGCGTATCATCAACGAGCCTACCGCTGCAGCTATCGCCTA 18086 Query 349735 TGGGCTTG---ATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGG 349791 ||| | | | ||| || ||| ||| || || || || ||||| || || || Sbjct 18087 TGGTTTGGACAAGAAAGTGGGTG---GTGAACGGAACATCCTCATCTTTGACTTGGGCGG 18143 Query 349792 TGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAAC 349851 ||| ||||||||||| || | || || ||||||| || || || ||||| ||| | || Sbjct 18144 TGGAACTTTTGATGTCTCCATTCTCACCATTGAAGAAGGCATCTTCGAAGTCAAATCCAC 18203 Query 349852 TGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGT 349911 || |||||||| || | ||||| ||||||||||| || || | || || || || Sbjct 18204 CGCGGGTGATACTCACTTGGGTGGTGAAGATTTTGACAACCGCATGGTCAATCACTTCGT 18263 Query 349912 TAAAGAATTTAAGCGTCAAGCTAAAATTGATA-TTGGAGA-TAATCCTAGAGCAATGCGT 349969 ||||||| || || |||| || || | | ||| | |||||| | || |||| Sbjct 18264 CCAAGAATTCAAACG-CAAG-TACAAGAAAGACTTGTCCACCAATCCTCGCGCTCTGCGA 18321 Query 349970 CGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCT 350029 || || | || || || ||||| || ||||| | | || || | |||||| | || Sbjct 18322 CGTCTCCGTACGGCTTGCGAACGGGCCAAGCGGACTCTGTCGTCCTCCACCCAAGCTTCG 18381 Query 350030 ATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGG 350089 | ||||| || || || || || | || || | | || ||||| || || || Sbjct 18382 GTCGAAATCGACTCGCTGTTCGAAGGTATCGACTTTTACACTTCGATTACCCGCGCCCGT 18441 Query 350090 TTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTA 350149 || ||||| | || || || || | || || ||||||||||| || |||| || Sbjct 18442 TTCGAAGAGCTTTGCGCCGACCTCTTCCGCGCCACCATGGATCCTGTTGAGAAAGCCTTG 18501 Query 350150 AAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACA 350209 || || || | |||| ||| | ||| | ||||| || ||||| || || Sbjct 18502 CGCGACGCCAAGCTTGACAAAGCCTCGATCAACGAAATTGTTTTGGTCGGTGGCTCCACG 18561 Query 350210 CGTATTCCAAAAGTTC---AACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCT 350266 ||||| || ||||| | ||| ||| | | || ||||| || |||||||||| Sbjct 18562 CGTATCCCGAAAGTGCAGAAACTGTTGCAA---GATTTTTTCAACGGCAAAGAACTGAAC 18618 Query 350267 AGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTA 350326 | || || || || || ||||||||||| || ||||| || || || || | ||||| Sbjct 18619 AAGTCCATCAACCCGGACGAAGCTGTTGCTTACGGTGCCGCCGTCCAAGCCGCCATTTTG 18678 Query 350327 TCTGG----AAAT---AAGAGTTCTAAAATTGATGATCTATTACTACTAGATGTAACTCC 350379 || |||| ||| | || || ||| || || || || || || | || Sbjct 18679 CACGGAGACAAATCCGAAGCGGTCCAAGATT--TGCTC-----CTGCTCGACGTCGCCCC 18731 Query 350380 ACTTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAG 350439 |||||| | || | || || |||| | || ||||| | ||| | |||| Sbjct 18732 TCTTTCGTTGGGTATCGAGACCGCTGGCGGTGTTATGACCCCCTTGATTAAGCGTAATAC 18791 Query 350440 TACTGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGT 350499 || | || || || || |||| ||||| | || | ||| || || ||||| | || Sbjct 18792 CACCATCCCGACCAAGCAGACCCAGACTTTCACAACGTATGCCGACAACCAGCCCGGCGT 18851 Query 350500 AACAATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGA 350559 |||||||||| ||||| ||||| || || ||||| || || | || | Sbjct 18852 CTTGATTCAAGTATACGAAGGGGAACGCGCCATGACAAAAGACAACAACTTGTTGGGCAA 18911 Query 350560 ATTTACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTT 350619 || || | | ||||| || || ||||||||||||||||||||||| | || Sbjct 18912 GTTCGAACTCACCGGTATTCCGCCTGCTCCGCGAGGAGTTCCTCAGATTGAAGTCACCTT 18971 Query 350620 CGATATTGATTCAAATGGTAT 350640 |||||| || | || ||||| Sbjct 18972 CGATATCGACGCCAACGGTAT 18992 Score = 116 bits (128), Expect = 1e-20 Identities = 359/550 (65%), Gaps = 4/550 (1%) Strand=Plus/Minus Query 183243 AAAATTGCAGCTTGAACAGCTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGA 183302 ||||| || ||||| || || ||||| || ||||||||||| || ||||| || || | Sbjct 18677 AAAATGGCGGCTTGGACGGCGGCACCGTAAGCAACAGCTTCGTCCGGGTTGATGGA-CTT 18619 Query 183303 GATAA-TTCTTTGCCATTAAAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGT 183361 | | | ||||||||| || ||||| ||| | || || || | ||| || || | || Sbjct 18618 GTTCAGTTCTTTGCCGTTGAAAAAATCTTGCAACAGTTTCTGCACTTTCGGGATACGCGT 18559 Query 183362 TGAACCACCGACTAATACTACTTCATCGATATTA-CTTTTACTAATTTGTGAATCTTTTA 183420 || |||||||| || || | ||| | ||| |||| | | ||| | || | Sbjct 18558 GGAGCCACCGACCAAAACAATTTCGTTGATCGAGGCTTTGTCAAGCTTG-GCGTCGCGCA 18500 Query 183421 AAACTTTTTCAACAGGGTCCATAGTTTTTCTAAATAAATCTATACATAACTCTTCTAATC 183480 | |||| |||||||| ||||| || | || | || || | |||||| || | Sbjct 18499 AGGCTTTCTCAACAGGATCCATGGTGGCGCGGAAGAGGTCGGCGCAAAGCTCTTCGAAAC 18440 Query 183481 TTGCTCTAGTTAAAGATGaaaaaaaGTCAATACCATTATATAAGGAATCAATTTCAATCG 183540 || | || | || | ||||||| ||||| | | | || || ||||| | || Sbjct 18439 GGGCGCGGGTAATCGAAGTGTAAAAGTCGATACCTTCGAACAGCGAGTCGATTTCGACCG 18380 Query 183541 ATGTTTGTGTAGATGATGATAATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGAC 183600 | | ||| || || || || | || | || || ||||| || || || | || || | Sbjct 18379 AAGCTTGGGTGGAGGACGACAGAGTCCGCTTGGCCCGTTCGCAAGCCGTACGGAGACGTC 18320 Query 183601 GTAATGATCTTGGATTATCTGTAATATCTTGTTTATGTTTTCTTTTAAATTCAGTAATAA 183660 | | | | ||||| | | |||| || | || | ||| ||||| | | Sbjct 18319 GCAGAGCGCGAGGATTGGTGGACAAGTCTTTCTTGTACTTGCGTTTGAATTCTTGGACGA 18260 Query 183661 AATGTTGAAGTAATCTTGTATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAG 183720 | || | | | | | ||||||||||||||||| || || ||||| || || || | Sbjct 18259 AGTGATTGACCATGCGGTTGTCAAAATCTTCACCACCCAAGTGAGTATCACCCGCGGTGG 18200 Query 183721 CTTTAACTTCAAATATTCCGTCTTCAATATTTAAAATTGATACATCAAATGTACCACCAC 183780 ||| ||||| || || || |||||||| | | ||| || |||||||| || ||||| | Sbjct 18199 ATTTGACTTCGAAGATGCCTTCTTCAATGGTGAGAATGGAGACATCAAAAGTTCCACCGC 18140 Query 183781 CCAAATCAAA 183790 |||| ||||| Sbjct 18139 CCAAGTCAAA 18130 >seq6222 Length=12937 Score = 181 bits (200), Expect = 3e-40 Identities = 181/235 (77%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || |||||||||||||| ||||| || || || | Sbjct 3958 TTTGCATACCACCACGCAGACGCAGGACTAGATGAAGAGTAGATTCTTTCTGGATGTTGT 4017 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || || || || |||||||| | || || || ||||| || | |||||| |||| Sbjct 4018 AGTCGGACAAAGTGCGACCATCTTCTAACTGCTTGCCGGCAAAAATCAAACGTTGTTGAT 4077 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | |||||||| ||||| || || || |||||||| || || || ||||| | || |||| Sbjct 4078 CGGGAGGAATGCCTTCCTTGTCTTGGATTTTAGCCTTGACGTTCTCAATGGTGTCTGATG 4137 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||| ||||| | || | ||||| || || || |||||||||||||||||||| Sbjct 4138 GTTCGACTTCCAAAGTGATCGTCTTGCCAGTGAGGGTTTTTACAAAAATCTGCAT 4192 Score = 176 bits (194), Expect = 1e-38 Identities = 180/235 (77%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||| ||||| | | || || | ||| || ||||| || |||||||| || | Sbjct 4642 TTTGCATACCGCCACGGAGACGGAGGACCAAATGGAGTGTAGATTCCTTTTGAATGTTGT 4701 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | ||||| | || || || ||||| | |||||| || || || |||| |||||| |||| Sbjct 4702 AGTCAGACAGGGTACGACCGTCTTCCAATTGTTTGCCGGCGAAAATTAAACGTTGTTGAT 4761 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||||||||| ||||||||||| |||||||| ||||| || || ||||| | || || | Sbjct 4762 CAGGAGGAATGCCTTCTTTATCTTGAATTTTGGCTTTGACGTTCTCAATAGTGTCGGAAG 4821 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||| ||||| | || | |||||||| || || ||||| || ||||| ||||| Sbjct 4822 GTTCGACTTCCAAAGTGATCGTCTTTCCCGTGAGAGTTTTGACGAAAATTTGCAT 4876 Score = 174 bits (192), Expect = 5e-38 Identities = 177/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||| || || || | |||||| | ||||| || || |||||||| ||||| ||||| Sbjct 4190 CATACCGCCTCGCAAACGTAGAACCAAGTGAAGGGTGGATTCTTTTTGGATATTGTAATC 4249 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 |||||| || || || ||||| | ||||| ||||| ||||||| ||||| ||||| || Sbjct 4250 AGATAAGGTACGACCGTCTTCCAACTGTTTGCCAGCGAAGATTAATCGTTGTTGATCGGG 4309 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||| |||||||| || || ||||| ||||| || || ||||| | ||||| || || Sbjct 4310 GGGAATGCCTTCTTTGTCTTGGATTTTGGCTTTGACGTTTTCAATGGTGTCAGAGGGCTC 4369 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| | || | || || ||||| || || || || ||||||||||| Sbjct 4370 GACTTCCAAAGTGATGGTTTTGCCGGTAAGAGTCTTCACGAAAATCTGCAT 4420 Score = 145 bits (160), Expect = 2e-29 Identities = 160/212 (75%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 ||| ||| ||| ||||| || || || || |||||||| || || || || || |||||| Sbjct 3754 AGACCAA-ATGGAGAGTTGATTCCTTCTGGATATTATAGTCGGACAAGGTACGACCATCT 3812 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || | ||| || || || ||||| | |||||||||||| |||||||| ||||| || || Sbjct 3813 TCCAATTGCTTACCGGCGAAGATCAAACGTTGCTGATCGGGAGGAATACCTTCCTTGTCT 3872 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 |||||||| ||||| || || ||||| | || || ||||||||||| | || | || Sbjct 3873 TGAATTTTGGCTTTGACGTTTTCAATGGTGTCGGACGGTTCAACTTCCAAGGTGATGGTT 3932 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || | ||||| || || || ||||| Sbjct 3933 TTGCCCGTCAAGGTTTTCACGAAGATTTGCAT 3964 >seq7016 Length=12204 Score = 168 bits (186), Expect = 2e-36 Identities = 370/551 (67%), Gaps = 5/551 (1%) Strand=Plus/Plus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 ||||| || || ||||| ||||| || || || ||||| | ||| | ||| ||| Sbjct 5344 GCTATTGGCATTGATTTGGGTACCACCTACTCCTGTGTGGGTGTATTCCAACATGGCAAA 5403 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || ||||| ||||| || || ||||||||| | || || || || ||||| || || ||| Sbjct 5404 GTGGAAATTATTGCCAACGACCAAGGTAACCGCACGACACCTTCTTACGTGGCTTTCACC 5463 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || |||||| |||| || || | || || || || | || || || | || Sbjct 5464 GACACCGAGCGTCTGATCGGCGACGCCGCCAAGAACCAGGTCGCCATGAACCCGACCAAC 5523 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCT 349438 || || |||||||||||||| || || ||| | |||| ||| | | || || Sbjct 5524 ACCGTCTTTGATGCTAAGCGTCTCATCGGTCGTCGTTTCGAGGACGCAACCGTCCAGTCC 5583 Query 349439 GATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAG 349498 || | || || | || || || | | || || | || || | || | Sbjct 5584 GACATGAAGCACTGGCCCTTCGAAGTCATC---AGCGATGGCGGCAAGCCTAAAATCCAA 5640 Query 349499 GTTGAATATAAAGGTGAA-CAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTT 349557 || |||| || || ||| | ||||| || || || |||||| |||| || ||||| | Sbjct 5641 GTCGAATTCAAGGGAGAAACCAAAACC-TTCTTCCCTGAAGAAGTTTCCTCCATGGTCCT 5699 Query 349558 AGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTAT 349617 ||||||||||||| ||||||||| ||||| || |||| || || | || || | Sbjct 5700 CACCAAAATGAAGGAAACTGCTGAAGCTTATTTGGGACAAACTGTCACCAACGCCGTCGT 5759 Query 349618 TACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCAT 349677 || || || || || || || ||| |||||||| || ||||| || || || | ||| Sbjct 5760 CACAGTCCCCGCTTACTTCAACGATTCCCAGCGTCAAGCTACAAAGGACGCCGGTACCAT 5819 Query 349678 TGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGG 349737 || || || || || || | || || || |||||||| ||||| || ||||| || || Sbjct 5820 CGCTGGCTTGAACGTCCTGCGTATCATCAACGAACCCACAGCTGCCGCTATTGCCTACGG 5879 Query 349738 GCTTGATAAAA 349748 | || |||| Sbjct 5880 TTTGGACAAAA 5890 >seq5580 Length=7482 Score = 116 bits (128), Expect = 1e-20 Identities = 229/339 (68%), Gaps = 0/339 (0%) Strand=Plus/Plus Query 223702 AGCAAATTCTGTATGTAATGCCTCATCTCTTGATATTAATTCATTTGAAAATGTTAATCC 223761 |||||| || ||| || |||| || | || || | || || ||||| || | || Sbjct 5625 AGCAAAATCGCAATGCAAACCCTCGTCACGCGAAATGAGCTCGTTGGAAAAAGTAAGACC 5684 Query 223762 AGGCATTAAACCTCTCTTTTTCATCCAAAATATTGCGCAAAAAGCTCCTGaaaaaaaTAT 223821 ||||| ||||||||||| |||| ||| || || | | ||||| || || ||||| || Sbjct 5685 GGGCATCAAACCTCTCTTCTTCAGCCAGAAAATGGAGGCAAAAGAGCCAGAGAAAAAAAT 5744 Query 223822 ACCTTCTACACAAGCAAACGCTACTAATCGTGTTGCAAAATTTGAATCTTTGTCTCCTAT 223881 ||| || || ||||| || | | ||| |||||| || ||||| || Sbjct 5745 ACCCTCGACGGCTGCAAAGGCGATGACTCGCTCAGCAAAACCTGCTGTGTTGTCAGAGAT 5804 Query 223882 CCATTTTAATGCCCAATCTGCTTTTTTCTTAATACAAGAAAAATTTTCTAAAGCATTAAA 223941 |||||| || |||||||| || || ||||| | ||||| || |||| | ||| || Sbjct 5805 CCATTTAAAGGCCCAATCGGCCTTCTTCTTTACACAAGGAAGGGTTTCGATAGCTCGGAA 5864 Query 223942 CAACTTCGATTTCTCATTATGATCACTTATATATGTTTCTATTAATTGACTATACATTAT 224001 || | || |||||||| | || | ||||| || || ||||| | ||||||| Sbjct 5865 CAGCATCTGTTTCTCATCAGGAGATCGGATATAAGTGTCGATTAAAAGTGAATACATTTC 5924 Query 224002 TGAATGTATATTTTCCATTGCTATTTGAAATCCATAAAA 224040 ||||| || |||||||| || || || || || || || Sbjct 5925 GGAATGAATGTTTTCCATGGCAATCTGGAAGCCGTAGAA 5963 >seq7774 Length=19145 Score = 95.1 bits (104), Expect = 4e-14 Identities = 137/188 (73%), Gaps = 8/188 (4%) Strand=Plus/Minus Query 377402 ATACGGTACAAGAAGGATTTTTTGGATTTTCA--GATAATGATAATATTTCTTCAATGCG 377459 |||| || | || ||| ||| || |||| | ||| ||||||| | | ||||| || Sbjct 16217 ATACAGTCAAGGAGGGAGCTTTCGGGTTTTTACTGATGTTGATAATTTCT-TTCAAA-CG 16160 Query 377460 TGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTAAG 377519 ||||||||| | || || ||| || || | ||||||||||| |||||||| || || Sbjct 16159 AGGCACACCAAGCGTTACGTTC---TTTGAAGACACACCAGCAAAATGGAAAGTGTTCAG 16103 Query 377520 AGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCTCC 377579 || | ||||| | ||||||||| | ||||| || || | | | || ||||||||||| Sbjct 16102 TGTCATCTGAGTGGCGGGCTCACCCAAAGACTGTGCGGCCAAAGCTCCCACCATTTCTCC 16043 Query 377580 AGGATTGA 377587 ||| |||| Sbjct 16042 AGG-TTGA 16036 >seq31002 Length=509 Score = 89.7 bits (98), Expect = 2e-12 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| |||| ||||||| ||||||||| |||||||||||| || |||||| | | Sbjct 350 GGGGGTGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGCGAGAGGCACGGGGATCGATA 291 Query 235950 CCCAGCATCTCCAT 235963 ||| |||||||||| Sbjct 290 CCCCGCATCTCCAT 277 >seq12440 Length=1014 Score = 89.7 bits (98), Expect = 2e-12 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| |||| ||||||| ||||||||| |||||||||||| || |||||| | | Sbjct 857 GGGGGTGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGCGAGAGGCACGGGGATCGATA 798 Query 235950 CCCAGCATCTCCAT 235963 ||| |||||||||| Sbjct 797 CCCCGCATCTCCAT 784 >seq12439 Length=8123 Score = 89.7 bits (98), Expect = 2e-12 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| |||| ||||||| ||||||||| |||||||||||| || |||||| | | Sbjct 407 GGGGGTGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGCGAGAGGCACGGGGATCGATA 348 Query 235950 CCCAGCATCTCCAT 235963 ||| |||||||||| Sbjct 347 CCCCGCATCTCCAT 334 Score = 87.8 bits (96), Expect = 5e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| |||| ||||||| ||||||||| |||||||||||| || |||||| | | Sbjct 240 GGGGGTGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGCGAGAGGCACGGGGATCGATA 181 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 180 CCCCGCATCTCCA 168 >seq5172 Length=19112 Score = 89.7 bits (98), Expect = 2e-12 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| |||| ||||||| ||||||||| |||||||||||| || |||||| | | Sbjct 9134 GGGGGTGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGCGAGAGGCACGGGGATCGATA 9075 Query 235950 CCCAGCATCTCCAT 235963 ||| |||||||||| Sbjct 9074 CCCCGCATCTCCAT 9061 >seq26419 Length=673 Score = 87.8 bits (96), Expect = 5e-12 Identities = 67/78 (86%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 235885 TATAGGGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGAT 235944 || |||||| ||||| |||| ||||||| ||||||||| |||||||||||| || ||||| Sbjct 351 TACAGGGGG-TGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGCGAGAGGCACGGGGAT 293 Query 235945 CAAAACCCAGCATCTCCA 235962 | | |||| ||||||||| Sbjct 292 CGATACCCCGCATCTCCA 275 >seq16930 Length=12865 Score = 87.8 bits (96), Expect = 5e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| |||| ||||||| ||||||||| |||||||||||| || |||||| | | Sbjct 11877 GGGGGTGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGCGAGAGGCACGGGGATCGATA 11818 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 11817 CCCCGCATCTCCA 11805 >seq6384 Length=7592 Score = 87.8 bits (96), Expect = 5e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| |||| ||||||| ||||||||| |||||||||||| || |||||| | | Sbjct 7279 GGGGGTGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGCGAGAGGCACGGGGATCGATA 7220 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 7219 CCCCGCATCTCCA 7207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1514077336650087