Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq985 82.4 4e-11 >seq985 Length=45870 Score = 82.4 bits (90), Expect = 4e-11 Identities = 113/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 65087 CGTGTTCCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAATTC 65146 || || |||||||||||| |||||| | || || |||||||| || || | ||| ||| Sbjct 12686 CGAGTGCCAAACTGACCAATTGGCAGCAGCAAGTTGATATTGTTCGAGCCCACAAAGTTC 12627 Query 65147 TGAGCCATTCCGATAATTGCTGCATTTAAACTCGCTTCACCGTGATGATATCCTGAATGT 65206 || |||| ||||| | | | || ||||||||||||||||| |||||||| Sbjct 12626 TGCGCCAAGTTAATAATGGTCCCCATCAAGGAGGCTTCACCGTGATGATAAGCTGAATGT 12567 Query 65207 TCAGAGACATATCCACTAAATTGAGCAACTTTTATTTC 65244 |||| || | ||| || || |||| ||| ||||| Sbjct 12566 TCAGCTACCGAACCAGCCAACTGGGCAATTTTAATTTC 12529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235505852291850