Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq5580 91.5 2e-13 >seq5580 Length=7482 Score = 91.5 bits (100), Expect = 2e-13 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 59973 TTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTC 60032 ||||| | || |||| || |||||| ||| || || || || ||||||||||| || Sbjct 5783 TTTGCTGAGCGAGTCATCGCCTTTGCAGCCGTCGAGGGTATTTTTTTCTCTGGCTCTTTT 5724 Query 60033 TGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAG 60092 | ||||||||||| || ||| | || | ||||| || || | ||| ||||||||| Sbjct 5723 GCCTCCATTTTCTGGCTGAAGAAGAGAGGTTTGATGCCCGGTCTTACTTTTTCCAACGAG 5664 Query 60093 CTGATTTCCCGGGACGAGGGCCTCCATCAGGAGTTTGC 60130 || ||||| || |||||||| | ||| || ||||| Sbjct 5663 CTCATTTCGCGTGACGAGGGTTTGCATTGCGATTTTGC 5626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548109093623760