Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26]
60,629 sequences; 109,181,683 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq5375 136 3e-27
>seq5375
Length=21980
Score = 136 bits (150), Expect = 3e-27
Identities = 241/346 (70%), Gaps = 4/346 (1%)
Strand=Plus/Plus
Query 29942 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 30001
|| || |||||||| |||||||| || || || | | || |||||||| || || ||
Sbjct 1124 AGGCCAGTGACGTGGGCCATCATATATGTTAGCAAGGCATAACTGGCGATATTGAAAGGC 1183
Query 30002 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 30061
||||| | ||||| || | || | ||| || | || || || ||||| |||| | |
Sbjct 1184 ACCCCTAAGCCCATATCAGCTGAACGCTGATACATTTGGCATGAAAGCTCGCCGTTGGCC 1243
Query 30062 ACGTAAAACTGACACATGGC-GTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGG 30120
|| |||||||| | | ||| |||||| |||||||| ||||| || ||| | ||
Sbjct 1244 ACATAAAACTG-CGCTAGGCAGTGGCAAGGAGGAAGTGCCATTTGGGGTAAGGCGCAAGG 1302
Query 30121 GTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGC 30180
||||||||||| | | ||||| | || ||||||||| | ||||| || |
Sbjct 1303 GTTCCAGGCGCTTAAAACCATGCGGCGATCATCTGGGTTGGTTTTGATGGTGTGGAGAAT 1362
Query 30181 GTTTTGCAGCTGATCCAC-CCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTG 30239
|| || ||| |||||||| || | | | || ||||| ||||| | ||| || |
Sbjct 1363 GTGTTCCAGTTGATCCACACCTTGTTGGCTA-TAATCTGCATGCATGTTGGAGTATTCGG 1421
Query 30240 CTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCC 30285
| |||||||| | ||||||||| ||||| || || |||| ||| ||
Sbjct 1422 CGCCGAAATGACGCCACTGGAAGCCGTAGACGGGACCCAAGTCGCC 1467
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406010170769868
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |