Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26]
60,629 sequences; 109,181,683 total letters
Query= NC_028943.1
Length=29237
Score E
Sequences producing significant alignments: (Bits) Value
seq9686 345 8e-91
>seq9686
Length=37809
Score = 345 bits (382), Expect = 8e-91
Identities = 386/511 (76%), Gaps = 5/511 (1%)
Strand=Plus/Plus
Query 21773 CCTTCTCCCAAACCAACGTTTATGAAAATGCAGAGATAACGGGTAAC-TGGCATCATCTC 21831
||| || |||||||||| |||| ||||||||| | | ||||| | |||||| ||| |
Sbjct 27077 CCTCCTACCAAACCAACCTTTAAGAAAATGCATAT-TCCCGGGTCAGATGGCATGATCAC 27135
Query 21832 CGGTTTTTATTCAGGGGGATGCTCA-TGCTTATTGGCTATGTACGCGTGTCAACAAATGA 21890
| |||| |||| || || |||| ||||||||||| ||||| |||||||||||
Sbjct 27136 GGCCTTTTGA--AGGGTGAAAACCAATGCTGATTGGCTATGTTCGCGTATCAACAAATGA 27193
Query 21891 CCAGAACACGGAATTGCAGCGTAACGCGCTGGAGTGCGCAGGATGTGAGCTGATTTTTGA 21950
||||||||| | ||| || || || ||||||||| ||||||| |||||||| ||||||||
Sbjct 27194 CCAGAACACCGCATTACAACGGAATGCGCTGGAGAGCGCAGGTTGTGAGCTAATTTTTGA 27253
Query 21951 GGATAAAATCAGCGGCACTAAGTCCGACCGACCGGGACTGAAAAAACTGCTCAGGACATT 22010
||||| ||||| |||| | ||| ||||| || || || || ||||||| || |
Sbjct 27254 AGATAAGATCAGTGGCAAAACGTCTGACCGCCCAGGGCTTAAGCGTGTGCTCAGAACGCT 27313
Query 22011 ATCGGAGGGGGATACACTGGTGGTCTGGAAGCTGGACAGGCTGGGGCGTAATATGCGGCA 22070
| ||| || ||||| |||||||| |||||| ||||| ||||||| || | ||||| ||
Sbjct 27314 AGGGGAAGGAGATACGCTGGTGGTTTGGAAGTTGGACCGGCTGGGACGCAGCATGCGACA 27373
Query 22071 TCTGGTCATTCTGGTTGAGGAACTGCGCGAACGCGGCGTTAATTTTCGCAGCCTGACGGA 22130
||| ||| | || || || |||||||| || | || |||| ||||| |||||||| ||
Sbjct 27374 TCTTGTCGTGCTCGTGGAAGAACTGCGTGATAGAGGGATTAACTTTCGGAGCCTGACAGA 27433
Query 22131 TGCTATTGATACCAGCACGCCGATGGGGCGTTTTTTCTTTCATGTGATGGGTGCCCTGGC 22190
||||||||||| |||||||||||||| || || || ||||| ||||| || |||||
Sbjct 27434 CAGCATTGATACCAGTACGCCGATGGGGCGGTTCTTTTTCCATGTAATGGGCGCACTGGC 27493
Query 22191 TGAAATGGAACGAGAACTCATTGTCGAGCGGACTCGGGCCGGGCTGGAAGCGGCCAGAGC 22250
|| ||||| ||||| || || ||||| || || || || || | | ||| || | ||
Sbjct 27494 CGAGATGGAGCGAGAGCTGATAGTCGAACGAACCCGCGCTGGTTTAGCAGCTGCACGCGC 27553
Query 22251 CAAAGGTCGTATTGGTGGCAGACGTCCTAAA 22281
| ||| | ||||| |||||||| || |||
Sbjct 27554 AGAGGGTAGGATTGGAGGCAGACGCCCAAAA 27584
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 93369528365502
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |