Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= NC_028943.1 Length=29237 Score E Sequences producing significant alignments: (Bits) Value seq9686 345 8e-91 >seq9686 Length=37809 Score = 345 bits (382), Expect = 8e-91 Identities = 386/511 (76%), Gaps = 5/511 (1%) Strand=Plus/Plus Query 21773 CCTTCTCCCAAACCAACGTTTATGAAAATGCAGAGATAACGGGTAAC-TGGCATCATCTC 21831 ||| || |||||||||| |||| ||||||||| | | ||||| | |||||| ||| | Sbjct 27077 CCTCCTACCAAACCAACCTTTAAGAAAATGCATAT-TCCCGGGTCAGATGGCATGATCAC 27135 Query 21832 CGGTTTTTATTCAGGGGGATGCTCA-TGCTTATTGGCTATGTACGCGTGTCAACAAATGA 21890 | |||| |||| || || |||| ||||||||||| ||||| ||||||||||| Sbjct 27136 GGCCTTTTGA--AGGGTGAAAACCAATGCTGATTGGCTATGTTCGCGTATCAACAAATGA 27193 Query 21891 CCAGAACACGGAATTGCAGCGTAACGCGCTGGAGTGCGCAGGATGTGAGCTGATTTTTGA 21950 ||||||||| | ||| || || || ||||||||| ||||||| |||||||| |||||||| Sbjct 27194 CCAGAACACCGCATTACAACGGAATGCGCTGGAGAGCGCAGGTTGTGAGCTAATTTTTGA 27253 Query 21951 GGATAAAATCAGCGGCACTAAGTCCGACCGACCGGGACTGAAAAAACTGCTCAGGACATT 22010 ||||| ||||| |||| | ||| ||||| || || || || ||||||| || | Sbjct 27254 AGATAAGATCAGTGGCAAAACGTCTGACCGCCCAGGGCTTAAGCGTGTGCTCAGAACGCT 27313 Query 22011 ATCGGAGGGGGATACACTGGTGGTCTGGAAGCTGGACAGGCTGGGGCGTAATATGCGGCA 22070 | ||| || ||||| |||||||| |||||| ||||| ||||||| || | ||||| || Sbjct 27314 AGGGGAAGGAGATACGCTGGTGGTTTGGAAGTTGGACCGGCTGGGACGCAGCATGCGACA 27373 Query 22071 TCTGGTCATTCTGGTTGAGGAACTGCGCGAACGCGGCGTTAATTTTCGCAGCCTGACGGA 22130 ||| ||| | || || || |||||||| || | || |||| ||||| |||||||| || Sbjct 27374 TCTTGTCGTGCTCGTGGAAGAACTGCGTGATAGAGGGATTAACTTTCGGAGCCTGACAGA 27433 Query 22131 TGCTATTGATACCAGCACGCCGATGGGGCGTTTTTTCTTTCATGTGATGGGTGCCCTGGC 22190 ||||||||||| |||||||||||||| || || || ||||| ||||| || ||||| Sbjct 27434 CAGCATTGATACCAGTACGCCGATGGGGCGGTTCTTTTTCCATGTAATGGGCGCACTGGC 27493 Query 22191 TGAAATGGAACGAGAACTCATTGTCGAGCGGACTCGGGCCGGGCTGGAAGCGGCCAGAGC 22250 || ||||| ||||| || || ||||| || || || || || | | ||| || | || Sbjct 27494 CGAGATGGAGCGAGAGCTGATAGTCGAACGAACCCGCGCTGGTTTAGCAGCTGCACGCGC 27553 Query 22251 CAAAGGTCGTATTGGTGGCAGACGTCCTAAA 22281 | ||| | ||||| |||||||| || ||| Sbjct 27554 AGAGGGTAGGATTGGAGGCAGACGCCCAAAA 27584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 93369528365502