Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq5375 95.1 1e-14 >seq5375 Length=21980 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/205 (72%), Gaps = 5/205 (2%) Strand=Plus/Plus Query 118533 AAGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGG 118592 ||| || || | ||| || ||||| ||||| | ||| || ||||| | ||| ||||| Sbjct 1123 AAGGCCAGTGACGTGGGCCATCATATATGTTAGCAAGGCATAACTGGCGATATTGAAAGG 1182 Query 118593 AACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGC 118652 || || | ||||| || ||||| | ||| |||| |||||| || ||||| ||||| || Sbjct 1183 CACCCCTAAGCCCATATCAGCTGAACGCTGATACATTTGGCATGAAAGCTCGCCGTTGGC 1242 Query 118653 AACATAAAACTGACTTATGATGTGACATGGAGGCAGAACCA-TGGAACTCAGTTGGGC-A 118710 ||||||||||| || | ||| || ||||| || ||| | | | || | || | Sbjct 1243 CACATAAAACTGCGCTAGGCAGTGGCAAGGAGGAAGTGCCATTTGGGGTAAG--GCGCAA 1300 Query 118711 GGATTCCAGGCTGTTAAAA-CATGC 118734 || |||||||| |||||| ||||| Sbjct 1301 GGGTTCCAGGCGCTTAAAACCATGC 1325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414170536486756