Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq6222 87.8 1e-12 >seq6222 Length=12937 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 101027 AACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCT 101086 || |||| |||| || |||||||| ||||| |||||||| | || || |||| Sbjct 5121 AATACCAAATGCAGGGTGGATTCTTTCTGAATGTTGTAATCTGACAACGTACGACCATCT 5180 Query 101087 TCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCG 101146 |||||||| ||||| || | || | | ||| ||||| ||| | ||||||||||| Sbjct 5181 TCCAATTGCTTGCCAGCGAAAATTAAACGTTGCTGGTCAGGGGGGATACCTTCTTTGTCT 5240 Query 101147 GCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTT 101206 |||||| ||| || | | | || || | | | | ||||| ||||||||| Sbjct 5241 TGAATTTTGGCTTTGACGTTTTCAATGGTATCCGAAGGCTCTACTTCGAGGGTAATAGTC 5300 Query 101207 TTGCCCGTCAATGTTTTAATAAAAATTTGCATT 101239 |||||||||| || || | || ||||||||| Sbjct 5301 TTGCCCGTCAGGGTCTTCACGAAGATTTGCATT 5333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409358095105911