Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq5375 113 4e-20 >seq5375 Length=21980 Score = 113 bits (124), Expect = 4e-20 Identities = 183/261 (70%), Gaps = 2/261 (1%) Strand=Plus/Plus Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773 || || |||||||| |||||||| || || || | | || |||||||| || || ||| Sbjct 1124 AGGCCAGTGACGTGGGCCATCATATATGTTAGCAAGGCATAACTGGCGATATTGAAAGGC 1183 Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833 ||||| | ||||| || |||| | ||| || | ||||| || ||||| |||| | | Sbjct 1184 ACCCCTAAGCCCATATCAGCTGAACGCTGATACATTTGGCATGAAAGCTCGCCGTTGGCC 1243 Query 29834 ACGTAAAACTGACACATGGCA-TGGCACGGAGGAAGGGCCATGAGACCCAAGTCTTTGGG 29892 || |||||||| | | |||| ||||| |||||||| ||||| | ||| | || Sbjct 1244 ACATAAAACTG-CGCTAGGCAGTGGCAAGGAGGAAGTGCCATTTGGGGTAAGGCGCAAGG 1302 Query 29893 GTTCCAGGCACACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGC 29952 ||||||||| | | | ||||| | || ||||||||| | ||||| || | Sbjct 1303 GTTCCAGGCGCTTAAAACCATGCGGCGATCATCTGGGTTGGTTTTGATGGTGTGGAGAAT 1362 Query 29953 GTTTTGCAGCTGATCCACCCC 29973 || || ||| |||||||| || Sbjct 1363 GTGTTCCAGTTGATCCACACC 1383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405863079538294