Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26]
60,629 sequences; 109,181,683 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq5375 120 2e-22
>seq5375
Length=21980
Score = 120 bits (132), Expect = 2e-22
Identities = 235/345 (68%), Gaps = 2/345 (1%)
Strand=Plus/Plus
Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267
|| || |||||||| |||||||| || || || | | || |||||||| || || ||
Sbjct 1124 AGGCCAGTGACGTGGGCCATCATATATGTTAGCAAGGCATAACTGGCGATATTGAAAGGC 1183
Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327
||||| | ||||| || | || | ||| || | || || || ||||| || | |
Sbjct 1184 ACCCCTAAGCCCATATCAGCTGAACGCTGATACATTTGGCATGAAAGCTCGCCGTTGGCC 1243
Query 27328 ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGG 27387
|| |||||||| || | |||||| |||||||| ||||| || ||| | |||
Sbjct 1244 ACATAAAACTGCGCTAGGCAGTGGCAAGGAGGAAGTGCCATTTGGGGTAAGGCGCAAGGG 1303
Query 27388 TTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCG 27447
|||||||||| | | ||||| | || ||||||||| | ||||| || | |
Sbjct 1304 TTCCAGGCGCTTAAAACCATGCGGCGATCATCTGGGTTGGTTTTGATGGTGTGGAGAATG 1363
Query 27448 TTTTGCAGCTGATCCAC-CCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCTGC 27506
| || ||| |||||||| || | | | || ||| | ||||| | ||| || ||
Sbjct 1364 TGTTCCAGTTGATCCACACCTTGTTGGCTA-TAATCTGCATGCATGTTGGAGTATTCGGC 1422
Query 27507 TCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCC 27551
|||||||| | ||| ||||| ||||| || || |||| ||| ||
Sbjct 1423 GCCGAAATGACGCCACTGGAAGCCGTAGACGGGACCCAAGTCGCC 1467
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369234165240899
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |