Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26]
60,629 sequences; 109,181,683 total letters
Query= NC_030929.1
Length=49033
Score E
Sequences producing significant alignments: (Bits) Value
seq9686 190 6e-44
>seq9686
Length=37809
Score = 190 bits (210), Expect = 6e-44
Identities = 424/629 (67%), Gaps = 13/629 (2%)
Strand=Plus/Plus
Query 7186 GGAACAGCAGATGATCCGTTGGTTCGGATACCTGCCGAGGTTTCTGATCACCCTGGCTGC 7245
||| ||||| ||| | |||||||| ||||| ||| | ||||| ||||| ||
Sbjct 5166 GGAGCAGCAAATGTACGAATGGTTCGGCAGGGTGCCGCAGTTCATCATCACGCTGGCAGC 5225
Query 7246 TGACTACTGCTCCCAGTGCTCCGACGCGGAGTTCTGCGCATTGGTCGAGCATGAGCTCTA 7305
|| ||||| || || || ||||| |||||||||||| || | ||||| ||||| ||
Sbjct 5226 AGATTACTGTTCGCAATGTTCCGATCTGGAGTTCTGCGCCCTGTTAGAGCACGAGCTTTA 5285
Query 7306 CCACATCTGCCAAGAGCACA-ACCAATATGGCGAGCCCAAGTTCACCGAGGAGGGCTTTC 7364
||||| |||| | | ||| | ||| ||||| ||| |||||||| |||| ||| | |
Sbjct 5286 TCACATTAGCCAGGCG-ACAGATGAATTTGGCGCGCCGAAGTTCACGCAGGAAGGCATGC 5344
Query 7365 CAAAGCTGAAGCTCCGCGGGCATGACGTCGAGGAGTTCGTCGGCGTGGTGAGGCGGTACG 7424
|||| |||||||| || || || || || || ||||| ||||| ||||| | || ||||
Sbjct 5345 CAAAACTGAAGCTGCGTGGCCACGATGTGGAAGAGTTTGTCGGTGTGGTTCGCCGCTACG 5404
Query 7425 GCCCAAGCAAGGACGTGCAGTATCTCATCGACGCTGCTAGCAGGCCTCCAGAGGTGGCCA 7484
| | ||| || |||||| | | || || || || | ||| | ||||| ||
Sbjct 5405 GTGCGAGCCGTGAAGTGCAGGAAATGATTGATGCGGCGAATCAGCCAGCGGAGGTTGCTC 5464
Query 7485 AAATTAACATTTCGAGAGCCTGCGGTACGTGCCTGCTGAAGTCGGCAT-AGCCACGACAG 7543
| | | ||| | ||||| ||||| || ||| ||||| ||| | | | ||| |
Sbjct 5465 ATCTCGATATTGCCAGAGCTTGCGGGACTTGCATGCTGCGACTGGCTTGAAACTGGACTG 5524
Query 7544 GCCCATGACAGGAA-GAAAAACGATGGCAACCCTGAACAGCGACGTGAAGGCGTTCATCG 7602
|| | | ||| | | ||||| | | || || ||||| || |||||||
Sbjct 5525 ---TATAAGACGAATGGTGATTTATGGCTGCATTAAAACCTGATGTGAAAGCCTTCATCG 5581
Query 7603 TTCAGGCGCTGGCCTGTTTCGATACGCCATCCCAGGTTGCGGAATCGGTCAAGAAGGAAT 7662
||||| ||| || || | || |||||||| || || | || | ||| | || || |
Sbjct 5582 TTCAGTTGCTTGCGTGCTATGACACGCCATCGCAAGTGGTCGAGACTGTCCAAAAAGAGT 5641
Query 7663 TCGGCATCGAGGTCAGTCGGCAGCAGATCGAGTCGCACGACCCGAACAAGGTGTGCAGCA 7722
|||||||| || ||| ||||||||| ||| |||||||| |||| ||||| || | |
Sbjct 5642 TCGGCATCAAGATCACCCGGCAGCAGGCCGAATCGCACGATCCGACCAAGGCCAGCGGTA 5701
Query 7723 AGGGCCTTGCCGCGAAGTGGCGGATC---CTCTTCGAGGACACCCGCAAGCGCTTCCGCG 7779
|| || ||||||| | ||||| | ||| | | || || | |||||||
Sbjct 5702 AGACGCT---CGCGAAGAAGTGGATCGAGATGTTCCACGCGACGCGAGAACGCTTCCTGA 5758
Query 7780 AGGAGATCGCCGACATCCCGATCGCCAAC 7808
|| | | |||||| ||||||||||||
Sbjct 5759 CCGAAACCAGCGACATTCCGATCGCCAAC 5787
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 156671120321510
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |