Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= NC_031129.1 Length=103445 Score E Sequences producing significant alignments: (Bits) Value seq9686 140 2e-28 >seq9686 Length=37809 Score = 140 bits (154), Expect = 2e-28 Identities = 113/137 (82%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 33977 TTTAGCCCTGGGCGTTCAGCCTTTTTGCCGCTCGCCTTGTCCTCAAAAATCAGCTCACAT 34036 || ||||||||||| |||| | ||||||| || ||| || |||||||| |||||||| Sbjct 27295 TTAAGCCCTGGGCGGTCAGACGTTTTGCCACTGATCTTATCTTCAAAAATTAGCTCACAA 27236 Query 34037 CCTGCGCTTTCAAGGGCATTTCGTTGCAAAGCAGTGTTTTGTTCATTTGTTGATACGCGT 34096 |||||||| || || ||||| ||||| || || ||||| || ||||||||||||||||| Sbjct 27235 CCTGCGCTCTCCAGCGCATTCCGTTGTAATGCGGTGTTCTGGTCATTTGTTGATACGCGA 27176 Query 34097 ACATAGCCTATTAGCAT 34113 |||||||| || ||||| Sbjct 27175 ACATAGCCAATCAGCAT 27159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330654693307414