Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tropilaelaps_20mercedesae_20[genbank_20GCA_5F002081605.1_202017-04- 06] 33,764 sequences; 352,534,912 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq19961 150 2e-31 seq7297 82.4 8e-11 >seq19961 Length=25414 Score = 150 bits (166), Expect = 2e-31 Identities = 420/637 (66%), Gaps = 12/637 (2%) Strand=Plus/Minus Query 16688 ACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCCATGAAATCAAAA 16747 || || || ||||| |||||||||||||| || | || || | |||||||||||| || Sbjct 14848 ACACGCTTCTCGAAGAAGTTAGTTTTGCCTTCCATGGAGATTTGCTCCATGAAATCGAAG 14789 Query 16748 GGATTA--GTAGCTGAA-AATATTTTAGAGTACCCCAGTTCGGCGATTAATCTATCCGCT 16804 ||||| | || | | ||| | | | ||| | || ||| | | ||| || Sbjct 14788 GGATTCTCGGAGTTCCATAATTTGTCACAGT---CTAGATCGCTAAGCAGGTGATCGGCC 14732 Query 16805 ACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTACCGGAAGA 16864 ||||| || || || || ||| | ||||||||||| || | | || || ||| Sbjct 14731 ACAAACTCGATGTACTGCTTCATGAGATCGCAGTTCATGCCGAGCATGGCAACAGGCAGA 14672 Query 16865 GCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGCA-ACTCG 16923 || || || | || || || ||| | ||||| ||||| ||||| || | | || Sbjct 14671 GCCTCGGTGAGGAACTCCTGTTCGATAGCTACCGCATCCTTGATAAT-CTGGTGGATTCT 14613 Query 16924 TTCCTCGGACGGTGTATGTTTA--AGATGTTTAAACATCAGACATGCGAAATCGCAATGT 16981 |||| | ||| | ||| | ||||| |||||||| || ||||| || ||| Sbjct 14612 CTCCTGGCTCGGCTT--GTTGACCAGATGCCAAAACATCAAGCAGGCGAACTCCGTATGC 14555 Query 16982 AATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGT 17041 | ||||| || | ||| || |||||| | || | |||||| | ||| ||| Sbjct 14554 ATGCCCTCATCGCGTGAGATGAGCTCGTTACTGTAGGTGAGCCCGGGTAGGAGTCCGCGT 14495 Query 17042 TTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCA 17101 ||||| | ||| || |||| |||||| | || ||||| || |||||||||| || Sbjct 14494 TTCTTCATCCAGAAGATCGAGGCGAAAGCTCCGCTGAAGAAGATGCCCTCGACGGCCGCG 14435 Query 17102 AACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCAC 17161 ||||||| | || ||| |||| || ||||| | ||| | ||||| | |||| Sbjct 14434 AACGCGACGACGCGCTCGCCGTAGGTGGCGTCGTCGTTCCCGATCCAGGCAAGGGCCCAG 14375 Query 17162 TCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCC 17221 ||||| || | || ||||| |||||| || ||||| || || | | || ||| Sbjct 14374 TCGGCCTTCTTTTTGATGCATGGCATCGTCTCGATGGCGTTGAAGAGGTGGTCGCGCTCC 14315 Query 17222 TGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCC 17281 || | ||| | || || || | || | || |||||||| || || ||||||||| Sbjct 14314 TGGGGATCGGTGATGTAGGTGTTGAGTAAGAGAGAATACATTTCCGAATGAATGTTCTCC 14255 Query 17282 ATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCG 17318 || |||||||| ||||| ||||| || || |||| Sbjct 14254 ATCATGATCTGAAACCCGTAGAAGCAGCGCGCCTCCG 14218 >seq7297 Length=15801 Score = 82.4 bits (90), Expect = 8e-11 Identities = 72/90 (80%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 58085 GAACGTATGGCGAATGCCGGAAAGGTGTTGATCGTGGCCGCGTTGGACGGAACGTTTCAA 58144 ||||| ||||| | | ||||| ||| |||| ||||| |||||||| || ||||||||| Sbjct 5251 GAACGGATGGCAAGTAAGGGAAAAGTGGTGATTGTGGCTGCGTTGGATGGCACGTTTCAA 5192 Query 58145 CGTAAACCGTTTACCAACATTTGTGAACTG 58174 |||||| ||| |||||||| ||||||| Sbjct 5191 CGTAAAGGCTTTGCCAACATTCTTGAACTG 5162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517327169879520