Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tropilaelaps_20mercedesae_20[genbank_20GCA_5F002081605.1_202017-04- 06] 33,764 sequences; 352,534,912 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq5480 84.2 2e-11 >seq5480 Length=41483 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 42901 ACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCC 42960 |||| |||| ||||| ||||| || | ||| || ||| | || || |||| ||| Sbjct 1715 ACCAGGTGGAGTGTGCTTTCCTTCTGAATATTATAGTCGCTGAGGGTGCGACCGTCCTCC 1656 Query 42961 AATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG 43020 | ||| || || || ||||| | ||||||||||||| || | || ||||| || | Sbjct 1655 AGTTGCTTTCCAGCGAAAATGAGACGCTGTTGATCGGGTGGGATGCCCTCTTTGTCTTGG 1596 Query 43021 ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTT 43080 ||| ||| || | ||| ||||| | | |||||| || | || || ||||| Sbjct 1595 ATCTTTGTTTTCACGTTTTCAATCGTGTCACTGGGCTCGACTTCGAGAGTAATGGTTTTG 1536 Query 43081 CCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 ||||| || || ||||| ||||| ||||| Sbjct 1535 CCGGTGAGGGTCTTCACGAAAATCTGCAT 1507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381212666886312