Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tropilaelaps_20mercedesae_20[genbank_20GCA_5F002081605.1_202017-04- 06] 33,764 sequences; 352,534,912 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq5480 105 7e-18 >seq5480 Length=41483 Score = 105 bits (116), Expect = 7e-18 Identities = 139/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 142993 TTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATA 143052 |||||| || |||||||| ||| ||| ||||| ||||| || ||||| || || | Sbjct 2074 TTCTTTCTGGATGTTGTAGTCGTTCAGTGTGCGACCATCTTCCAGCTGTTTTCCCGCGAA 2015 Query 143053 GATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTG 143112 || ||||| ||||||||||| || || || || ||||| ||||| || | | Sbjct 2014 AATAAGACGCTGCTGATCGGGGGGAATACCCTCCTTGTCTTGGATTTTAGTCTTGACGTT 1955 Query 143113 TTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTAC 143172 ||| | |||||| | ||||| || || | || | ||||||||||| | || || || Sbjct 1954 TTCAATCGTGTCGGCCGGTTCCACCTCCAATGTGATTGTCTTGCCGGTGAGGGTCTTGAC 1895 Query 143173 GAATATTTGCATA 143185 ||||||||||||| Sbjct 1894 GAATATTTGCATA 1882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506800414572480