Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tropilaelaps_20mercedesae_20[genbank_20GCA_5F002081605.1_202017-04- 06] 33,764 sequences; 352,534,912 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq5480 95.1 9e-15 >seq5480 Length=41483 Score = 95.1 bits (104), Expect = 9e-15 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 ||||||||||| || || || ||||| ||||| || | | ||||||||| |||| Sbjct 1253 TGAAGGGTGGATTCCTTCTGGATGTTATAATCTGAGAGGGTCCGGCCGTCTTCTAGTTGT 1194 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 ||||| || | ||||| | || || || || || || |||||||| ||||| Sbjct 1193 TTGCCGGCAAAAATCAACCTCTGCTGATCCGGCGGGATGCCCTCTTTGTCCTGGATTTTT 1134 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340 ||||||| |||| || ||||| ||| || || | |||||| || || || ||| Sbjct 1133 GTCTTTACGTTTTCGATCGTATCCGAGCCTTCGACGTCGAGGGTAATCGTCTTCCCAGTC 1074 Query 15341 AGAGTTTTTACAAAAATTTGCATATTT 15367 | ||||| || || |||||||| ||| Sbjct 1073 AACGTTTTGACGAAGATTTGCATTTTT 1047 Score = 86.0 bits (94), Expect = 5e-12 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219 ||| ||||| || || || || ||||||||||| | | | | || || | || Sbjct 2554 ATGGAGGGTTGACTCCTTCTGAATGTTGTAATCAGACAAGGTGCGACCATCCTCGAGCTG 2495 Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279 ||| || ||| | || | ||| |||||||| ||||| || || ||||| ||| || Sbjct 2494 TTTACCCGCGAAGATGAGACGCTGTTGGTCAGGCGGAATGCCCTCCTTGTCTTGAATCTT 2435 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 |||| ||| |||| ||||| ||||| || || || | ||||||||||| || || Sbjct 2434 CGTCTTAACATTTTCAATGGTGTCGCTTGGCTCAACCTCGAGCGTAATGGTTTTGCCAGT 2375 Query 15340 CAGAGTTTTTACAAAAATTTGCATA 15364 || ||||| || || || |||||| Sbjct 2374 GAGCGTTTTGACGAAGATCTGCATA 2350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362030163711924