Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tropilaelaps_20mercedesae_20[genbank_20GCA_5F002081605.1_202017-04- 06] 33,764 sequences; 352,534,912 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq5480 95.1 1e-14 >seq5480 Length=41483 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576 ||| | ||| || || |||||| |||||||||||||||| ||| || | ||||| Sbjct 2560 CACCAGATGGAGGGTTGACTCCTTCTGAATGTTGTAATCAGACAAGGTGCGACCATCCTC 2501 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 ||||| ||||| || | || | |||||| || || ||| | | |||||||| Sbjct 2500 GAGCTGTTTACCCGCGAAGATGAGACGCTGTTGGTCAGGCGGAATGCCCTCCTTGTCTTG 2441 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 ||| ||| ||| | | | ||||| ||| | | ||| ||||| || |||||||| Sbjct 2440 AATCTTCGTCTTAACATTTTCAATGGTGTCGCTTGGCTCAACCTCGAGCGTAATGGTTTT 2381 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || ||||| ||||| || || |||||||| Sbjct 2380 GCCAGTGAGCGTTTTGACGAAGATCTGCAT 2351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421077855657764