Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tropilaelaps_20mercedesae_20[genbank_20GCA_5F002081605.1_202017-04- 06] 33,764 sequences; 352,534,912 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq2599 304 3e-77 >seq2599 Length=48712 Score = 304 bits (336), Expect = 3e-77 Identities = 924/1412 (65%), Gaps = 33/1412 (2%) Strand=Plus/Plus Query 363760 TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAG 363819 |||||||| | || |||||||| || || | | |||||||| |||| || |||||| Sbjct 36535 TCGAATGGTATCGTACCCATGCTACGCGTATACAATAATACTGCCCGGTATGTTGACCAG 36594 Query 363820 GGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATT 363879 || ||| || | ||| ||||||||||| ||||| ||||| || | || ||| Sbjct 36595 GGGGGAAATAAAAGGCCAGGTGCGTTTGCTATTTATCTGGAGCCATGGCACGGAGACATT 36654 Query 363880 TTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTG 363939 || || || || || || || ||||| || || | || ||| ||||| |||||||| Sbjct 36655 TTCGAATTCCTCGACCTGCGAAAAAATACCGGCATCGAAGAACATCGTGCGCGTGATCTC 36714 Query 363940 TTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAG--GCAGGTA---AGA 363994 ||||||||||||||| || |||| | ||||| |||| ||| || | || | | Sbjct 36715 TTCTATGCACTTTGGATTCCTGATCTGTTTAT-----GCGTAGAGTCGCCGATAATGACA 36769 Query 363995 ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACT 364054 ||||||||| | || || || ||||| ||| | ||| ||||| || || | Sbjct 36770 GTTGGTCACTTATGTGTCCCAACTCGTGTCCTGGTTTAAGCGACTGCTGGGGAGAAGAGT 36829 Query 364055 ATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCT-CGTAAGACA-ATTCCCGC 364112 || | |||||||| || ||| ||| || ||| || |||| | ||||| Sbjct 36830 TTGACAAGTTGTACGAAAAATACGAAATGGAAGG--CCGCTATTTACGACAGGTGCCCGC 36887 Query 364113 ACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTT 364172 ||||| || |||| ||| || | ||| |||||||| || || || || |||||| | Sbjct 36888 TCAGAAACTTTGGTATGCTATTCTTGATAGCCAGATTGAAACTGGCACCCCGTATATGCT 36947 Query 364173 GTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAG 364232 ||||| ||| | || ||||| ||| ||| || || || |||| || ||| || Sbjct 36948 CTACAAGGATGCATGTAACCGTAAGAGCAATCAACAAAACGTTGGAACGATTAAGTGTTC 37007 Query 364233 CAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCT 364292 || ||||||| || ||||||| ||| | ||||||| || | ||| || ||||| || Sbjct 37008 TAATTTATGTACAGAAGTTATTGAGTACTCGTCTCCCGATGAAATTGCAGTCTGTAATCT 37067 Query 364293 TGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGATGGTACTTTTGACCACCAGCATCTTTA 364352 ||| || | ||||| |||||| || || ||| || ||| ||| | | | Sbjct 37068 TGCCTCTCTAGCGCTCAATCGGTTTGTCAAGGAGGGTTATTACGACTTCCAAAAATTAAA 37127 Query 364353 TGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCC 364412 || || || | | || || | || || |||| |||| || | ||||| || Sbjct 37128 AGAGGTGACGAAACTTGTGACACGAAACCTTAACAAAATTATTGATGTTACCTATTACCC 37187 Query 364413 AATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGG 364472 | | || ||||| |||||| || | |||||||| || |||||| |||| ||||| || Sbjct 37188 AGTCCCGGAAGCTGAGCGTGGCAACAAACGTCATCGTCCAATTGGTATTGGCGTACAAGG 37247 Query 364473 CCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCT 364532 || || || | |||||| || | | | || ||| || || || | || Sbjct 37248 TCTTGCAGATGCTTTTATCATAATGCGTCTACCTTTCGATAGCCCGGAAGCAATGGAACT 37307 Query 364533 AAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGC 364592 || || |||| ||||||||||| || | | || | || ||||| | || Sbjct 37308 TAACAAAAAGATATTTGAAACAATTTACTACGGTGCGTTAGAAGCAAGCTGTGAACTAGC 37367 Query 364593 AAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCA 364652 | | || | ||| || |||| || || ||| | || |||| | ||| || Sbjct 37368 TGAGGTTGAAGGCACATACGAGACATATGTTGGCTCGCCTGTCTCTAAGGGTATATTGCA 37427 Query 364653 GTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAA 364712 || |||| | ||| |||||| || || | ||| |||||| |||| || | || Sbjct 37428 GTATGATATGTGGGGTGTCACCCCTACTTCTCTTTGGGACTGGG--ACGC-ACTT---AA 37481 Query 364713 CGTTAAGA------AGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGC 364766 || || | | || || || ||| || | || |||||||||||||| Sbjct 37482 AGTGAAAATTGCACAACACGGCGTACGGAACAGTCTTCTATTGGCTCCCATGCCCACGGC 37541 Query 364767 TTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTA 364826 || || |||||||| || || || || || | | | || ||| ||||| ||| | || Sbjct 37542 ATCGACCGCACAGATACTTGGCAATAATGAATCCATTGAGGCGTACACAAGTAATGTATA 37601 Query 364827 TTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCT 364886 | | ||||| || | || || || |||| |||||| || | | | | || ||||| Sbjct 37602 TGCTCGCCGAGTGTTGTCAGGCGAGTTTCAGGTAGTGAACCACCATTTGCTTAAAGATCT 37661 Query 364887 TTCCGACCGCGGGCTGTGGGGTGACAGC-ATGAAGAACTATATCATCGCCGCTAATGGTT 364945 | || | || ||||| |||| ||| ||| ||| | | | ||| || |||| Sbjct 37662 CACAGAACTGGGATTGTGGAGTGA-AGCGATGCGTAACGAACTGGTGGCCTACAACGGTT 37720 Query 364946 CTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGG 365005 |||| || || | || | ||||||||||||| |||| ||||| || || |||| Sbjct 37721 CTGTCCAAAAGCT--CAATA-TTCCAGAAGATCTCAAGCTGCTTTACCGCACTGTGTGGG 37777 Query 365006 AAATTTC-CATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAG 365064 | || | || ||| | |||| | ||||| ||||||||||||||||||||| || Sbjct 37778 AGATCCCGCAGAAGAA-TATCATCAAGATGGCAGCCGATCGCGGTGCTTTTATCGACCAA 37836 Query 365065 AGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCAT 365124 ||||||||||| ||||| |||| || | ||| | || || ||||| ||||| Sbjct 37837 AGCCAGTCGTTAAACGTTCACATGGCTGAAACAAATTATAGTAAACTGACATCAATGCAC 37896 Query 365125 TTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 || ||||| ||| | ||||| |||||||| Sbjct 37897 TTTTACGGCTGGGAGCTTGGTCTCAAGACAGG 37928 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302789767603448