Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tropilaelaps_20mercedesae_20[genbank_20GCA_5F002081605.1_202017-04- 06] 33,764 sequences; 352,534,912 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq5480 134 1e-26 >seq5480 Length=41483 Score = 134 bits (148), Expect = 1e-26 Identities = 170/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| |||| | || | ||| | || || || || |||||||||||||| Sbjct 2580 ATCCCTCCACGGAGTCGAAGCACCAGATGGAGGGTTGACTCCTTCTGAATGTTGTAATCA 2521 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || ||| ||| || || |||||||| ||| ||||||||||||||||||| || Sbjct 2520 GACAAGGTGCGACCATCCTCGAGCTGTTTACCCGCGAAGATGAGACGCTGTTGGTCAGGC 2461 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTC 114331 |||||||| || ||||| |||| || || ||| | | ||||| ||||||| | | || Sbjct 2460 GGAATGCCCTCCTTGTCTTGAATC-TTCGTCTTAACATTTTCAATGGTGTCGCTTGGCTC 2402 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | |||||||| || || ||||| || || |||||||| Sbjct 2401 AACCTCGAGCGTAATGGTTTTGCCAGTGAGCGTTTTGACGAAGATCTGCAT 2351 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 114191 TTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTA 114250 ||| || ||||| || || ||||| | || ||| || || ||||| || |||||| | Sbjct 1698 TTCCTTCTGAATATTATAGTCGCTGAGGGTGCGACCGTCCTCCAGTTGCTTTCCAGCGAA 1639 Query 114251 GATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTG 114310 |||||||||||||| || || || ||||| |||||||| |||||| ||| | | Sbjct 1638 AATGAGACGCTGTTGATCGGGTGGGATGCCCTCTTTGTCTTGGATCTTTGTTTTCACGTT 1579 Query 114311 TTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 114370 ||||| ||||| ||| ||||| || | || | ||||||||||| || || || || Sbjct 1578 TTCAATCGTGTCACTGGGCTCGACTTCGAGAGTAATGGTTTTGCCGGTGAGGGTCTTCAC 1519 Query 114371 AAAAATCTGCAT 114382 ||||||||||| Sbjct 1518 GAAAATCTGCAT 1507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419961515219568