Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tropilaelaps_20mercedesae_20[genbank_20GCA_5F002081605.1_202017-04- 06] 33,764 sequences; 352,534,912 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq2599 131 2e-25 >seq2599 Length=48712 Score = 131 bits (144), Expect = 2e-25 Identities = 462/719 (64%), Gaps = 22/719 (3%) Strand=Plus/Minus Query 113941 ATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGA 114000 ||| | ||| | ||||| | ||||| | | ||||| || || | || || ||||| || Sbjct 37602 ATATACATTACTTGTGTACGCCTCAATGGATTCATTATTGCCAAGTATCTGTGCGGTCGA 37543 Query 114001 GGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTC 114060 || ||||||||||| |||| ||||| ||||| || | || | || ||| | Sbjct 37542 TGCCGTGGGCATGGGAGCCAATAGAAGACTGTTCCGTACGCCGTGTTGTGCAATTTTCAC 37483 Query 114061 CTTGAGGGCGTCCCAGTC-------GTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAA 114113 || || ||||||||||| | ||| | | | | | |||| |||||||| Sbjct 37482 TTTAAGTGCGTCCCAGTCCCAAAGAGAAGTAGGGGT--GACACCCC-----ACATATCAT 37430 Query 114114 ACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCT 114173 |||| | ||||| | ||| | ||||| || || |||||||||||| ||| ||||||| Sbjct 37429 ACTGCAATATACCCTTAGAGACAGGCGAGCCAACATATGTCTCGTATGTGCCTTCAACCT 37370 Query 114174 CCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCAT 114233 | || | ||| |||| || || | || ||| || ||||| ||||| || | Sbjct 37369 CAGCTAGTTCACAGCTTGCTTCTAACGCACCGTAGTAAATTGTTTCAAATATCTTTTTGT 37310 Query 114234 TCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGA 114293 | | | || | || || | ||| || | || || | ||||| |||| || | Sbjct 37309 TAAGTTCCATTGCTTCCGGGCTATCGAAAGGTAGACGCATTATGATAAAAGCATCTGCAA 37250 Query 114294 GACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAG-ACTTTCGAGCGGTCTCC 114352 ||||||| || || | |||||||| ||||| | | || || || ||| | Sbjct 37249 GACCTTGTACGCCAATACCAATTGGACGATGACGTTTGTTGCCACGCTC-AGCTTCCGGG 37191 Query 114353 ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATT 114412 || || ||| | | ||| |||| | || || ||| || |||| || || | Sbjct 37190 ACTGGGTAATAGGTAACATCAATAATTTTGTTAAGGTTTCGTGTCACAAGTTTCGTCACC 37131 Query 114413 TCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCG 114472 || | | |||| | | || || | | || |||||| || | || || Sbjct 37130 TCTTTTAATTTTTGGAAGTCGTAATAAC------CCTCCTTGACAAACCGATTGAGCGCT 37077 Query 114473 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTA 114532 | || || |||||||| || | | ||||| | | |||||| |||| ||| ||| Sbjct 37076 AGAGAGGCAAGATTACAGACTGCAATTTCATCGGGAGACGAGTACTCAATAACTTCTGTA 37017 Query 114533 CACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCA 114592 || ||||| |||| |||||| || || | ||| | |||||| ||| |||||| ||| Sbjct 37016 CATAAATTAGAACACTTAATCGTTCCAACGTTTTGTTGATTGCTCTTACGGTTACATGCA 36957 Query 114593 TCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 114651 |||||||| ||||| || || || || || || | ||| | |||||||| | ||| Sbjct 36956 TCCTTGTAGAGCATATACGGGGTGCCAGTTTCAATCTGGCTATCAAGAATAGCATACCA 36898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597101486913120