Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tropilaelaps_20mercedesae_20[genbank_20GCA_5F002081605.1_202017-04- 06] 33,764 sequences; 352,534,912 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq2959 87.8 1e-12 >seq2959 Length=41342 Score = 87.8 bits (96), Expect = 1e-12 Identities = 131/183 (72%), Gaps = 6/183 (3%) Strand=Plus/Minus Query 108766 AGGTACGCCCTCACCCTCAACTTTACGTGGCTGGTCAATTCGGCGGCGCACATGTACGGC 108825 |||||| | |||| || ||| | || ||| |||| || ||||| |||||||||| ||| Sbjct 27370 AGGTACTGCTTCACGCTGAACATGACCTGGTTGGTGAACTCGGCAGCGCACATGTGGGGC 27311 Query 108826 GACCGTCCGTTCGACAAGAACATTTTCCCAAGAGAAAACAAATTGGTGGCG-GCGTTGGC 108884 | || | ||||| ||||| ||| || ||| | ||| | | || | ||| Sbjct 27310 CAGAAGCCCTACGACACCCACATTAACCCGGCGGAGAAC---TGGGTCGTGAGCATCGGC 27254 Query 108885 TCTC--GGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCGCC 108942 | | || ||||||||||| |||||||||||| |||||||||||||||||| | || Sbjct 27253 GCCCAGGGTGAGGGATGGCATAACTACCACCACACATTCCCCTACGACTACAAGACGTCC 27194 Query 108943 GAG 108945 ||| Sbjct 27193 GAG 27191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381615700970016