Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tropilaelaps_20mercedesae_20[genbank_20GCA_5F002081605.1_202017-04- 06] 33,764 sequences; 352,534,912 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq5480 89.7 4e-13 >seq5480 Length=41483 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/207 (70%), Gaps = 4/207 (2%) Strand=Plus/Minus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGTCTTCTAAT 15030 ||| ||||| || || || || ||||||||||| || || || | || || | Sbjct 2554 ATGGAGGGTTGACTCCTTCTGAATGTTGTAATCA--GACAAGGTGCGACCATCCTCGAGC 2497 Query 15031 TGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATT 15090 ||||| || ||| | || | |||||||||||| ||||| || |||||||| ||| Sbjct 2496 TGTTTACCCGCGAAGATGAGACGCTGTTGGTCAGGCGGAATGCCCTCCTTGTCTTGAATC 2437 Query 15091 TTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCT 15150 || | || ||| |||| || || ||||| || || || | ||||||||||| || Sbjct 2436 TTCGTCTTAACATTTTCAATGGTGTCGCTTGGCTCAACCTCGAGCGTAATGGTTTTGCCA 2377 Query 15151 GTCAGAGTTTTTACAAAAATTTGCATA 15177 || || ||||| || || || |||||| Sbjct 2376 GTGAGCGTTTTGACGAAGATCTGCATA 2350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357244933638740