Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tropilaelaps_20mercedesae_20[genbank_20GCA_5F002081605.1_202017-04- 06] 33,764 sequences; 352,534,912 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq5480 93.3 3e-14 >seq5480 Length=41483 Score = 93.3 bits (102), Expect = 3e-14 Identities = 155/224 (69%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 39496 CCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAA 39555 || |||||||| ||||||| ||| | ||||||||||| || || || || ||| || Sbjct 2106 CCACGCAAACGGAGTACCAGATGGAGCGTGCTTTCTTTCTGGATGTTGTAGTCGTTCAGT 2047 Query 39556 ACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACG 39615 ||| |||| |||| ||||| || | ||||| | |||||||||||| | ||| | Sbjct 2046 GTGCGACCATCTTCCAGCTGTTTTCCCGCGAAAATAAGACGCTGCTGATCGGGGGGAATA 1987 Query 39616 CCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCC 39675 || || ||||| ||||| || | | | | ||||| || |||||| ||| Sbjct 1986 CCCTCCTTGTCTTGGATTTTAGTCTTGACGTTTTCAATCGTGTCGGCCGGTTCCACCTCC 1927 Query 39676 AAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || || ||||| || || || | || || ||||| || ||||| Sbjct 1926 AATGTGATTGTCTTGCCGGTGAGGGTCTTGACGAATATTTGCAT 1883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347226657843812