Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tropilaelaps_20mercedesae_20[genbank_20GCA_5F002081605.1_202017-04- 06] 33,764 sequences; 352,534,912 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq5480 91.5 1e-13 >seq5480 Length=41483 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 ||| |||||||| ||||| || || || | || | || || | |||||| || || || Sbjct 2770 CTCCTTTTGAATGTTGTAGTCTGAAAGGGTGCGGCCATCTTCGAGCTGCTTGCCCGCGAA 2711 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 |||| | ||| || || | || | ||||||||| || |||||| || || Sbjct 2710 GATCAACCTCTGCTGGTCGGGCGGGATGCCCTCCTTATCTTGAATCTTGGCCTTAACGTT 2651 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | | ||||||| ||||||||||| || ||||| ||||| |||| ||||| || Sbjct 2650 TTCGATTGTGTCTGACGGCTCCACCTCCAGTGTGATCGTCTTTCCGGTCAGCGTTTTCAC 2591 Query 48755 AAAAATCTGCATC 48767 |||||| |||||| Sbjct 2590 AAAAATTTGCATC 2578 Score = 89.7 bits (98), Expect = 4e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 || || || || || || || || || | || |||| ||||| ||||| |||||||| Sbjct 1469 TCCTTCTGGATGTTATAGTCCGAGAGGGTGCGCCCGTCCTCCAATTGCTTGCCGGCAAAG 1410 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTT-ACAGA 48694 ||||| | ||||||||| | || | |||||||||||| || ||||||||| ||| Sbjct 1409 ATCAGCCTCTGTTGATCAGGAGGGATGCCCTCCTTGTC-CTGGATTTTTGTTTTCACATT 1351 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | | || || | ||| || || | ||||||||||| || || | || || || Sbjct 1350 CTCGATTGTGTCAGAGGGCTCGACGTCGAGGGTAATCGTTTTGCCGGTGAGGGTCTTCAC 1291 Query 48755 AAAAATCTGCATC 48767 || ||||||||| Sbjct 1290 GAAGATCTGCATC 1278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380780844653772