Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tropilaelaps_20mercedesae_20[genbank_20GCA_5F002081605.1_202017-04- 06] 33,764 sequences; 352,534,912 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq19961 206 5e-48 >seq19961 Length=25414 Score = 206 bits (228), Expect = 5e-48 Identities = 459/681 (67%), Gaps = 21/681 (3%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||| || ||||| || | ||||| |||||||| || || || |||| ||||| | ||| Sbjct 14861 CTGATACTCCCCGACACGCTTCTCGAAGAAGTTAGTTTTGCCTTCCATGGAGATTTGCTC 14802 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTT--ATACACCCGTGTCAGGCCC-ATCTGTTCCAG 47955 |||||| |||||| || | ||| ||| | || ||| | ||| | || Sbjct 14801 CATGAAATCGAAGGGATTCTCGGAGTTCCATA-ATTTGTCACAGTCTAGATCGCTA--AG 14745 Query 47956 CAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAG 48015 ||||||||| || || |||||||||| | |||||| | ||||||||| | | Sbjct 14744 CAGGTGATCGGCCACAAACTCGATGTACTGCTTCATGAGATCGCAGTTCATGCCGAGCAT 14685 Query 48016 GGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAAT 48075 || || |||| ||||| ||||| ||||||| || || || || ||| | ||| Sbjct 14684 GGCAACAGGCAGAGCCTCGGTGAGGAACTCCTGTTCGATAGCTACCGCATCCTTGATAAT 14625 Query 48076 CTGCTTAA----CGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGC 48131 ||| | | | | | ||| || |||||| ||| ||| | | | || || Sbjct 14624 CTGGTGGATTCTCTCCTGGCTC----GGCTTGTTGACCAGATGCCA---AAACATCAAGC 14572 Query 48132 AGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGAC 48191 |||| || ||| | |||| ||| || || || ||||||| |||| | || ||| | Sbjct 14571 AGGCGAACTCCGTATGCATGCCCTCATCGCGTGAGATGAGCTCGTTACTGTAGGTGAGCC 14512 Query 48192 CAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGA 48251 | || | || || | | || | |||||| || | ||||||| || |||||||| Sbjct 14511 CGGGTAGGAGTCCGCGTTTCTTCATCCAGAAGATCGAGGCGAAAGCTCCGCTGAAGAAGA 14452 Query 48252 TGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGA 48311 ||||||| || |||||||||||| || | ||| ||| | | |||| | || || Sbjct 14451 TGCCCTCGACGGCCGCGAACGCGACGACGCGCTCGCCGTAGGTGGCGTCGTCGTTCCCGA 14392 Query 48312 TCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGA 48371 |||||| ||| |||||||| |||||||| |||||||||||||||||||| ||||| || Sbjct 14391 TCCAGGCAAGGGCCCAGTCGGCCTTCTTTTTGATGCATGGCATCGTCTCGATGGCGTTGA 14332 Query 48372 AGAGCTTCTTGCACTCACCTGCG--TCCGCAACATAGGTAGTGAGCAGCTTTGCGTACAT 48429 |||| | | || || |||| | || | | ||||| |||| | | ||||| Sbjct 14331 AGAGGTGGTCGCGCT--CCTGGGGATCGGTGATGTAGGTGTTGAGTAAGAGAGAATACAT 14274 Query 48430 CTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACAC 48489 || || || | ||||| || |||||| |||||||||||| | ||||| ||| Sbjct 14273 TTCCGAATGAATGTTCTCCATCATGATCTGAAACCCGTAGAAGCAGCGCGCCTCCGTCAC 14214 Query 48490 CTGCACTTCTGTGGAGAATCT 48510 |||||| ||| |||||| || Sbjct 14213 CTGCACGTCTTGGGAGAACCT 14193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931139646581760