Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tropilaelaps_20mercedesae_20[genbank_20GCA_5F002081605.1_202017-04- 06] 33,764 sequences; 352,534,912 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq5480 87.8 4e-12 >seq5480 Length=41483 Score = 87.8 bits (96), Expect = 4e-12 Identities = 129/183 (70%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 ||| ||||| || || | || || | || |||||||| || || |||||||| | || Sbjct 1461 GATGTTATAGTCCGAGAGGGTGCGCCCGTCCTCCAATTGCTTGCCGGCAAAGATCAGCCT 1402 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 |||||||||||| || || || || || || || ||||| |||| ||||| || | Sbjct 1401 CTGTTGATCAGGAGGGATGCCCTCCTTGTCCTGGATTTTTGTTTTCACATTCTCGATTGT 1342 Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533 || || | || || || || ||||| ||||| || || | || || | || ||||| Sbjct 1341 GTCAGAGGGCTCGACGTCGAGGGTAATCGTTTTGCCGGTGAGGGTCTTCACGAAGATCTG 1282 Query 192534 CAT 192536 ||| Sbjct 1281 CAT 1279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984054112721400