Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tropilaelaps_20mercedesae_20[genbank_20GCA_5F002081605.1_202017-04- 06] 33,764 sequences; 352,534,912 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq5480 89.7 4e-13 >seq5480 Length=41483 Score = 89.7 bits (98), Expect = 4e-13 Identities = 144/202 (71%), Gaps = 4/202 (2%) Strand=Plus/Plus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGA-AACGGAGGC 107611 ||||||||||| || |||||||| || || || || || |||||| |||| || |||| Sbjct 1048 AAAATGCAAATCTTCGTCAAAACGTTGACTGGGAAGACGATTACCCTCGACGTCGAAGGC 1107 Query 107612 TGGCGATACTGTCGGCCAGGTAAA-ACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGG 107670 | | ||||| ||| | ||||| |||||| || || ||||| ||| | || || Sbjct 1108 TCG-GATACGATCGAAAACGTAAAGACAAAA-ATCCAGGACAAAGAGGGCATCCCGCCGG 1165 Query 107671 ATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACT 107730 |||||||||| | |||| ||| || ||||| || || |||| | || | | || | Sbjct 1166 ATCAGCAGAGGTTGATTTTTGCCGGCAAACAACTAGAAGACGGCCGGACCCTCTCAGATT 1225 Query 107731 ACAACATTCAAAAGGAGTCTAC 107752 | ||||| || ||||| || || Sbjct 1226 ATAACATCCAGAAGGAATCCAC 1247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398712662695396