Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tropilaelaps_20mercedesae_20[genbank_20GCA_5F002081605.1_202017-04- 06] 33,764 sequences; 352,534,912 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq2599 134 3e-26 >seq2599 Length=48712 Score = 134 bits (148), Expect = 3e-26 Identities = 397/605 (66%), Gaps = 13/605 (2%) Strand=Plus/Plus Query 110558 AGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGG 110617 ||| ||||||||| | ||| | |||||| || |||||| |||| || ||||| Sbjct 36417 AGGAATTTATGATACGCTTCGTCAGTGTGCTCTCATCTCTAAATCTGCTGGTGGCATTGG 36476 Query 110618 TATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTC 110677 ||| || | || |||| | || || | |||| || | || || |||| Sbjct 36477 AATTAACATACACTGTATTAGGCCAGCTGGGTCTTATATAGCTGGTACAAATGGAACTTC 36536 Query 110678 AACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGG 110737 | ||| | || || ||| || | || | ||| | ||||| ||||| | || || Sbjct 36537 GAATGGTATCGTACCCATGCTACGCGTATACAATAATACTGCCCGGTATGTTGACCAGGG 36596 Query 110738 TGGTAAGAGAAAT---GGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATT 110794 || || | || || | |||||||| ||||| || || ||||| ||| || || Sbjct 36597 GGGAAATAAAAGGCCAGGTGCGTTTGCTATTTATCTGGAGCCATGGCACGGAGACATTTT 36656 Query 110795 TGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATT 110854 |||||| | || || || |||||| || | |||||||| | || |||||| | || Sbjct 36657 CGAATTCCTCGACCTGCGAAAAAATACCGGCATCGAAGAACATCGTGCGCGTGATCTCTT 36716 Query 110855 TTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTC 110914 |||||| | |||||| | ||| | || ||| | || || |||| || ||||| Sbjct 36717 CTATGCACTTTGGATTCCTGATCTGTTTATGCGTAGAGTCGCCGATAATGACAGTTGGTC 36776 Query 110915 TCTTATGTGTCCTCA-TCGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAG 110973 ||||||||||| | ||| | ||||||| || || | ||| |||||||||| Sbjct 36777 ACTTATGTGTCCCAACTCG-TGTCCTGGTTTAAGCGACTGCTGGGGAGAAGAGTTTGACA 36835 Query 110974 ACCTTTACGAAAAATATGAAAAAGAAG---GCAAGTTTCGCAAACAAATTCCAGCTCAAG 111030 | | ||||||||||| |||| |||| || | || || ||| | || ||||| Sbjct 36836 AGTTGTACGAAAAATACGAAATGGAAGGCCGCTATTTACG---ACAGGTGCCCGCTCAGA 36892 Query 111031 AACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATA 111090 ||||||||| || ||||| || |||||||||| || || ||||| | || | Sbjct 36893 AACTTTGGTATGCTATTCTTGATAGCCAGATTGAAACTGGCACCCCGTATATGCTCTACA 36952 Query 111091 AAGAT-CATATTAATCGCAAATCTAATCAAATGAATTTAGGAACAATTAAGTCTAGTAAT 111149 | ||| ||| ||| || || |||||| || | ||||| ||||||| | |||| Sbjct 36953 AGGATGCAT-GTAACCGTAAGAGCAATCAACAAAACGTTGGAACGATTAAGTGTTCTAAT 37011 Query 111150 TTGTG 111154 || || Sbjct 37012 TTATG 37016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186299383299204