Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tropilaelaps_20mercedesae_20[genbank_20GCA_5F002081605.1_202017-04- 06] 33,764 sequences; 352,534,912 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq2797 102 3e-18 seq27404 98.7 3e-17 seq18089 98.7 3e-17 seq11388 98.7 3e-17 >seq2797 Length=31365 Score = 102 bits (112), Expect = 3e-18 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 2767 TGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 |||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 27978 TGGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGA 27919 Query 2827 CCCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 27918 TCCCGGGTTTCGGC 27905 >seq27404 Length=75800 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 68824 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 68765 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 68764 CCGGGTTTCGGC 68753 >seq18089 Length=16687 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 15512 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 15571 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 15572 CCGGGTTTCGGC 15583 >seq11388 Length=89201 Score = 98.7 bits (108), Expect = 3e-17 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 2767 TGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 |||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 74362 TGGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGA 74303 Query 2827 CCCCGGGCTTCAGC 2840 ||| || ||| || Sbjct 74302 TCCCTGGTTTCGGC 74289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15843746841780