Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tropilaelaps_20mercedesae_20[genbank_20GCA_5F002081605.1_202017-04- 06] 33,764 sequences; 352,534,912 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq2939 132 6e-26 >seq2939 Length=42873 Score = 132 bits (146), Expect = 6e-26 Identities = 371/564 (66%), Gaps = 8/564 (1%) Strand=Plus/Minus Query 146877 GAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTT 146936 ||| || ||||| ||||| || | || || ||| | | || |||| |||||| | Sbjct 15503 GAGTTTCGGGAACGGTCGTGGCTGTCTTTTCAACTGTTTCTGAAGCGGCTGGACGTGGGT 15444 Query 146937 GAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCAC 146996 | ||| || || | ||| || || || ||||| ||||| |||||||| || || Sbjct 15443 TAAGTACACATGTGTGTCACCAGTCGTATGGACAAAATCCCCAGGCTTAAGACCAGTATA 15384 Query 146997 GTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCC 147056 ||| || | || | |||||||| | ||| ||| |||||||| || || || ||||| Sbjct 15383 GTGAGCGATGATATGCGTGAGCAGAGCGTACGAGGCAATGTTGAACGGCACACCTAGGCC 15324 Query 147057 CATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAACTG 147116 |||||| | | ||||||| || ||||| | ||| |||| ||| ||||| ||||| Sbjct 15323 CATGTCGGCACTGCGTTGGTACAATTGACACGACAACTCACCGTTGGCAACGTAGAACTG 15264 Query 147117 GCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGA 147176 |||| ||||||||| || |||||||| || ||||| | ||||| || || Sbjct 15263 CGCCAGGCAGTGGCACGGTGGAAGCGCCATCTTCTTCAAGTCCGAGACATTCCAAGCAGA 15204 Query 147177 GACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAACCCACCTCAGCTG 147236 | | | || | | || || || | | | | ||||||| | | | || Sbjct 15203 TAAAATAATGCGGCGGTCATCCGGATTAACCCTGAGCGTGTCGATAATCTGGGTAATTTG 15144 Query 147237 GTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCA-GTCCACGTACCTGGCCCCAAAGTGCC 147295 ||| |||||||| || |||| | | | ||| || ||| || || ||||| | Sbjct 15143 GTCAACGCCCTGATCCGTGTAG-TCGGCGTGCATATCGCTGTATGCAGCTCCGAAGTGAC 15085 Query 147296 TCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCCCGCCC 147355 ||||||||||||||| || || || || ||||| | | | ||| || || ||| Sbjct 15084 GCCACTGGAAGCCGTATACGGGGCCGAGATCGCC-CTCCTCCCGTGAGAAAAAGCCG--A 15028 Query 147356 GCTT---GAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCGGAGA 147412 |||| ||||| || | || || | ||||| |||||| ||| ||||| | || | Sbjct 15027 GCTTATCCAGAAATTCCCGCGATCCATTGGCGTTCCAGATATTCACGCCCTTCTCTGATA 14968 Query 147413 GCTCCTTAGAGTCCGTGGAGCCCC 147436 | ||||| | | ||| || |||| Sbjct 14967 GATCCTTTGCATTCGTTGAACCCC 14944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583241738889600