Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tropilaelaps_20mercedesae_20[genbank_20GCA_5F002081605.1_202017-04- 06] 33,764 sequences; 352,534,912 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq29777 111 2e-19 >seq29777 Length=19435 Score = 111 bits (122), Expect = 2e-19 Identities = 281/425 (66%), Gaps = 12/425 (3%) Strand=Plus/Minus Query 178885 CCCGTGCCGATGCCTTCGGTTCCGTTCACGAGAACCATTGGAAGCGTTGGCATATAGAAG 178944 ||||| |||||||| || | |||||||| || ||||| || | | |||| ||| | Sbjct 14584 CCCGTACCGATGCCCTCAGCACCGTTCACCAGCACCATCGGTATGATCGGCAGATAATAA 14525 Query 178945 TCTGGTTCAATCGCACGCCCGTCATCATCCAAA---TAATTGAGCACGGGGTCGTCCCTC 179001 || || || || | || || || ||| || |||||||| |||||||| Sbjct 14524 TCCGGCTCGATTTTCTG---GTTGTCGTCGAAAAGGTAGTTGAGCACCGGGTCGTCGGAG 14468 Query 179002 GGATCAAAGATTTTACGAGCATCCCTGGTGAGTTTTGTGAAGATGTACCTCGTTTGAGAC 179061 | | ||| | | || || | | | | |||||||| |||||||| | | ||| Sbjct 14467 GCAGGAAATAGACTTCGTGCTAACGGGCTCAACTTTGTGAAAATGTACCTGGGT---GAC 14411 Query 179062 GCA---TCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTG 179118 ||| || ||||||||| || ||||| || || |||||| |||| || || ||| Sbjct 14410 GCAGAGTCCTTGCCACCCTGCAGCCGCGTGCCGAACTGACCAATGGGCTGTAGCAGGTTG 14351 Query 179119 ATATTGTTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGTATCCGCGAGGGAGACT 179178 || ||||| |||| | ||| | |||| ||||| || || | ||| || Sbjct 14350 ATGTTGTTGCTGCCCACGAAGTTCTGCGCCAGGTTGACGATTGTCATCATGAGCGACTGC 14291 Query 179179 TCACCGTGATGGTAAGCCGACTTGTCCGCCACATATGCCGCCAACTGCGCCACCTTCATC 179238 |||||||| ||||| || ||| | || || || | | ||||||||||||||||||| Sbjct 14290 TCACCGTGGTGGTAGGCTGACATTTCGGCGACGGAACCGGCCAACTGCGCCACCTTCACT 14231 Query 179239 TCATCCTTGAGGTTCTTGTGGAAGCACGCATACATCACCTTTCTTTGTGAAGGCTTGAGG 179298 || |||| ||| | | ||| || | ||| ||||| | ||| ||||||||| Sbjct 14230 TCCCGCTTGTCGTTTCTCTTGAAACATGTGAACAGTACCTTACGCTGTCCAGGCTTGAGA 14171 Query 179299 CCGTC 179303 ||||| Sbjct 14170 CCGTC 14166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618174189423840