Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tropilaelaps_20mercedesae_20[genbank_20GCA_5F002081605.1_202017-04- 06] 33,764 sequences; 352,534,912 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq5480 93.3 3e-14 >seq5480 Length=41483 Score = 93.3 bits (102), Expect = 3e-14 Identities = 141/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 27784 AGTAAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAA 27843 || ||||||||||| || || ||||| | |||||||| ||||| | || |||||| Sbjct 1045 AGAAAAATGCAAATCTTCGTCAAAACGTTGACTGGGAAGACGATTACCCTCGACGTCGAA 1104 Query 27844 AGCACCGA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGA 27901 || | || |||| | || || || |||||| |||||||| || | ||| Sbjct 1105 GGCTCGGATACGATCGAAAAC--GTAAAGACAAAAATCCAGGACAAAGAGGGCATCCCGC 1162 Query 27902 TGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCG 27961 ||| ||||| |||| ||||||||||| |||||| | || |||| || | | | || | Sbjct 1163 CGGATCAGCAGAGGTTGATTTTTGCCGGCAAACAACTAGAAGACGGCCGGACCCTCTCAG 1222 Query 27962 ATTACAACATCCAAAAAGA 27980 |||| |||||||| || || Sbjct 1223 ATTATAACATCCAGAAGGA 1241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355715963067228