Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq44371 96.9 3e-15 seq25273 89.7 4e-13 >seq44371 Length=3624 Score = 96.9 bits (106), Expect = 3e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 20972 ATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTG 21031 |||||| || || ||||||||||||||||| || |||| |||| | |||| |||| || Sbjct 1118 ATGCAACGTAGATTCCTTTTGAATGTTATAATCAGCCAAGGTTCGTCCGTCTTCCAATTG 1177 Query 21032 TTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTT 21091 |||||| || |||| | | |||||||| || | ||||||||||| ||||| Sbjct 1178 TTTGCCAGCGAAAATTAAGCGTTGCTGGTCAGGTGGAATTCCTTCCTTGTCTTGAATCTT 1237 Query 21092 TTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGT 21151 ||| || || | | |||||| || || || | || ||||| || || || Sbjct 1238 AGCTTTAACATGTTCAATAGTATCCGAAGGTTCAACCTCAAGTGTGATGGTTTTACCCGT 1297 Query 21152 TAACGTTTTGACAAATATTTGCATTT 21177 | ||||| ||||| |||||||||| Sbjct 1298 AAGAGTTTTAACAAAAATTTGCATTT 1323 >seq25273 Length=2210 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 ||||||| ||| | || || ||||| || ||||||||||| || || || | ||||| Sbjct 1754 AGCACCAAATGGAGTGTCGATTCCTTCTGTATGTTATAGTCGGCTAGAGTACGTCCGTCC 1813 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 |||||||| ||||| ||| | || | | ||||| || || | || ||||| || Sbjct 1814 TCCAGCTGCTTGCCAGCAAAGATTAAACGTTGCTGATCTGGAGGAATACCCTCCTTATCT 1873 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||||| || || | | | |||||| ||||| ||| | || || ||| Sbjct 1874 TGGATCTTGGCCTTTACATTTTCAATAGTATCGGATGGCTCAACTTCTAAAGTGATAGTC 1933 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||||| || || || |||||||| |||||||| Sbjct 1934 TTGCCTGTCAATGTCTTGACAAAAATTTGCAT 1965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421914645993632