Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq25273 87.8 3e-12 >seq25273 Length=2210 Score = 87.8 bits (96), Expect = 3e-12 Identities = 162/238 (68%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | ||||| | || |||||||| || || | || | || || | Sbjct 2193 ATGCAAATCTTCGTGAAGACTTTGACTGGCAAAACCATCACCTTGGAAGTCGAGCCATGT 2134 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || || || |||| ||||| |||||||||||||| || || || |||||| Sbjct 2133 GACACTATCGAGAACGTAAAGGCTAAAATCCAAGATAAAGAAGGCATTCCCCCAGATCAA 2074 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | ||||| || || || ||||| || ||| | || | || || || || Sbjct 2073 CAACGTTTAATTTTCGCTGGCAAGCAATTGGAAGATGGCCGTGCCTTGTCCGACTACAAC 2014 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 || ||||| || || || | || ||||| | || || || |||||||| ||| || Sbjct 2013 ATCCAAAAGGAGTCTACCCTTCACTTGGTCCTCCGCTTGCGTGGTGGTATGCAAATTT 1956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 754823758873600