Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq25273 116 3e-21 seq44371 84.2 2e-11 >seq25273 Length=2210 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| |||||| || || || ||||| ||||||||||||| || | | |||| Sbjct 1982 AGGACCAAGTGAAGGGTAGACTCCTTTTGGATGTTGTAGTCGGACAAGGCACGGCCATCT 2041 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||||||| ||||| || | || | | ||||||||| ||| | |||||| ||||| Sbjct 2042 TCCAATTGCTTGCCAGCGAAAATTAAACGTTGTTGATCTGGGGGAATGCCTTCTTTATCT 2101 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 |||| ||| || | | | |||||||| |||||| ||| | ||||||| || Sbjct 2102 TGGATTTTAGCCTTTACGTTCTCGATAGTGTCACATGGCTCGACTTCCAAGGTGATGGTT 2161 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||| ||||| || || || || |||||||| Sbjct 2162 TTGCCAGTCAAAGTCTTCACGAAGATTTGCAT 2193 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||| || || | ||| |||| || ||||| ||||| || || ||||| |||||||| Sbjct 1739 CCTCCGCGAAGACGAAGCACCAAATGGAGTGTCGATTCCTTCTGTATGTTATAGTCGGCT 1798 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | || |||| || ||||| ||| |||| | | ||| ||||| || Sbjct 1799 AGAGTACGTCCGTCCTCCAGCTGCTTGCCAGCAAAGATTAAACGTTGCTGATCTGGAGGA 1858 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | || |||||||| || | ||| || | | ||| ||| || ||||| | Sbjct 1859 ATACCCTCCTTATCTTGGATCTTGGCCTTTACATTTTCAATAGTATCGGATGGCTCAACT 1918 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || | ||||| | ||||| |||||||| || |||||||||||||| Sbjct 1919 TCTAAAGTGATAGTCTTGCCTGTCAATGTCTTGACAAAAATTTGCAT 1965 >seq44371 Length=3624 Score = 84.2 bits (92), Expect = 2e-11 Identities = 140/200 (70%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 18129 GTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCC 18188 || ||||| ||||||||||| || || |||| ||| | ||||||||||||||||| Sbjct 1125 GTAGATTCCTTTTGAATGTTATAATCAGCCAAGGTTCGTCCGTCTTCCAATTGTTTGCCA 1184 Query 18189 GCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGC-TT 18247 || | || | | ||| || || || | |||||||| || ||| | | || || Sbjct 1185 GCGAAAATTAAGCGTTGCTGGTCAGGTGGAATTCCTTCCTTGTCTTGAATCT-TAGCTTT 1243 Query 18248 GACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGT 18307 || ||| ||| ||| || || || |||| |||||| |||| || || | || Sbjct 1244 AACATGTTCAATAGTATCCGAAGGTTCAACCTCAAGTGTGATGGTTTTACCCGTAAGAGT 1303 Query 18308 TTTTACAAAAATTTGCATTT 18327 ||| |||||||||||||||| Sbjct 1304 TTTAACAAAAATTTGCATTT 1323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379034463831240