Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq44017 129 7e-25 >seq44017 Length=1387 Score = 129 bits (142), Expect = 7e-25 Identities = 278/411 (68%), Gaps = 5/411 (1%) Strand=Plus/Minus Query 62067 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 62126 || ||||| ||||||| ||| ||||| || ||||| ||||| |||| || |||||| Sbjct 410 GCCGGTTTGGTACGTAAATAATACATGCCAGTTTTGAGACCCGCCTTCCAACCATAAAAA 351 Query 62127 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 62186 || ||| ||||| ||| ||| | || || |||| ||| ||||| | ||||||||| Sbjct 350 TGTATAGATGTTAGCTTGCCATAGTTTGGTTCAGCTACATGTATATTAAACGATTGACTT 291 Query 62187 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGCAATTTCC 62246 ||||| || || || || | || || ||||| || || | ||||| | |||||| Sbjct 290 TGATCAATAAACGCGCCACGATCAGCGGCCATCTTCATTGTAGTCTTCACCGATATTTCC 231 Query 62247 CAAATAGTTTTATAAA-CTCGCTTAATATCTTCTGG-AAGGTTTGTATTC--TGAATGGA 62302 || | ||| || |||| || | | || | || ||| | | || || | || || || Sbjct 230 CACACAGTCTTGTAAAGTTCACGT-ATTTTTTGTGGTATAGATTCAATACCTTGTATTGA 172 Query 62303 TCCACCATCTACCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAA 62362 |||| | ||||| || | || || || |||| ||| || ||||| | Sbjct 171 ACCACGACTGGTTATAATTTTAGTTTTCATTTCTTCATCCCACAAACCCAATTCGGTAAG 112 Query 62363 AACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCCAGACAATACTCTCCGAGTGTA 62422 | | | | | ||| | ||||| ||||| ||||| || || | ||| | ||| | || Sbjct 111 ATCGCGCAACAAATGATGATTAACAACTTGAAATTCGCCCGAAAGTACGCGACGATTATA 52 Query 62423 AATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGC 62473 ||| ||| ||||| ||||| | || |||||||| |||| |||||| || Sbjct 51 AATGTTAGAAGTATAAGGTTCAAAAGATTCATTATTGCCCATAATTTGTGC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629290505650560