Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_003356.1 Length=42575 Score E Sequences producing significant alignments: (Bits) Value seq65974 141 3e-29 >seq65974 Length=1275 Score = 141 bits (156), Expect = 3e-29 Identities = 315/476 (66%), Gaps = 4/476 (1%) Strand=Plus/Minus Query 32160 AAAGATTTCTGATGTTGTGACCCGTATTGGCCCTTTAGG--CAGTGTTGCGGGTGTGGCC 32217 ||| || ||||| ||||||||||||||||||| | || ||||| |||||| | ||| Sbjct 1261 AAAAATCTCTGAAATTGTGACCCGTATTGGCCCACTGGGTGCAGTG--GCGGGTCTTGCC 1204 Query 32218 TCCGGAGAGATTGCCGCAATGGGGGCAACCNNNNNNNNNNNNNNNNTGGAATCAGAAATT 32277 ||||| |||||||||||| |||| ||||| | || ||||| | Sbjct 1203 TCCGGTGAGATTGCCGCACTGGGCGCAACAATTGCCGGTATGGGCGTCGAGTCAGATGTG 1144 Query 32278 GCAGCGACGGGGATAAAGAATTTTATGCTGTCGCTGACAGCGGGGGATTCCGCCACCAAA 32337 || | || || || || || ||||||||| || | || ||| | || || || ||| Sbjct 1143 GCCTCAACTGGTATCAAAAACTTTATGCTGGCGTTAACCAAAGGGAAATCAGCGACAAAA 1084 Query 32338 TCGCAGAAAAAAGTGCTCCGCTCGTTGCGCATTAGCCCGAAAAAACTGGCGGCGGATATG 32397 || || |||| | | | ||| | || || || || ||||||||||| || | ||| Sbjct 1083 TCACAAAAAATTGCGTTACGCACCTTAAAAATCAGTCCCAAAAAACTGGCCGCACAGATG 1024 Query 32398 CAGAAAGACGCCCGTGGGGCCATGCTGCACGTACTGGATTCTCTGGCGAAATTGCCGAAA 32457 || |||||||| || ||||| || || ||| | | | | |||| | || ||| Sbjct 1023 CAAAAAGACGCGAAAGGTGCCATATTGATGGTGCTGAAAGCCTTTGAGAAAGTCCCTAAA 964 Query 32458 GAAAAACAGGTCGCCGCGCTTAATGAACTGTTCGGCAAGGAATCTTCTGGATCCATTGCG 32517 || | || | | | | ||||| |||| ||| ||||| ||| | ||||| Sbjct 963 AAAGATCATGCCACATTATTAAATGATTTGTTTGGCTCTGAATCCCTTGGGGCAATTGCA 904 Query 32518 CCGCTGCTCACGAATCTGGATTTGTTGCGAACCAATTTTAATCGTGTGGCGGATGCGCAG 32577 ||||||||||| || || | || | | ||| | |||| || || ||| || Sbjct 903 CCGCTGCTCACCAACCTTAAATTACTAGAAGTTAATCTGGATCGCGTCGCCGATAAACAA 844 Query 32578 CAGTATGGCGGCTCAATGCAGAAAGAATATGCTGCCCGTGCCGCGACGACGGAAAA 32633 |||| |||||||| ||||| || ||||||||| | || || || || || | ||| Sbjct 843 AAGTACGGCGGCTCTATGCAAAAGGAATATGCTACTCGGGCAGCTACTACCGCAAA 788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136010178385488