Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq44017 116 3e-21 >seq44017 Length=1387 Score = 116 bits (128), Expect = 3e-21 Identities = 284/426 (67%), Gaps = 11/426 (3%) Strand=Plus/Minus Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849 |||||||| |||| ||||| ||||| |||| ||| || | | ||||||||| |||||| Sbjct 437 TCAACTGTAAATTGTATAGCATTTGCAGCCGGTTTGGTACGTAAATAATACATGCCAGTT 378 Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTA 36909 || || ||| |||| || |||||||| ||| || || || | || | || | | Sbjct 377 TTGAGACCCGCCTTCCAACCATAAAAATGTATAGATGTTAGCTTGCCATAGTTTGGTTCA 318 Query 36910 TCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATT 36969 ||| || ||| | | |||||||||||||| |||||||| || | || || |||| Sbjct 317 GCTACATGTATATTAAACGATTGACTTTGATCAATAAACGCGCCACGATCAGCGGCCA-- 260 Query 36970 TCTAAAATACATTTTTGA--GATATCTCCCAAACCGTTTTATATATTTGTTTTATATTAT 37027 ||| | | | | || | ||||| ||||| || || || || | || ||| || | Sbjct 259 TCTTCATTGTAGTCTTCACCGATATTTCCCACACAGTCTTGTAAAGTTCACGTATTTTTT 200 Query 37028 CTGGTA---AATCTAAATGTTGAATAGAACCATTATGTAACACAATTGTATTCTTTATGT 37084 ||||| | || | | ||| || |||||| | | |||| || | || || | Sbjct 199 GTGGTATAGATTCAATACCTTGTATTGAACCACGACTGGTTATAATTTTAGTTTTCATTT 140 Query 37085 CATTATTCCACATATTTCTACTT--ATTAGTTCTCTCAATAGGTGTGGATTTACAACCTG 37142 | | || ||||| | | | || | || || | ||| | || |||| ||||| || Sbjct 139 CTTCATCCCACAAA--CCCAATTCGGTAAGATCGCGCAACAAATGATGATTAACAACTTG 82 Query 37143 AAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTC 37202 ||| || || || | ||| | | |||| || || |||||| ||||||| || || Sbjct 81 AAATTCGCCCGAAAGTACGCGACGATTATAAATGTTAGAAGTATAAGGTTCAAAAGATTC 22 Query 37203 ATTATT 37208 |||||| Sbjct 21 ATTATT 16 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468132691594880