Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq25972 82.4 7e-11 >seq25972 Length=1146 Score = 82.4 bits (90), Expect = 7e-11 Identities = 130/182 (71%), Gaps = 6/182 (3%) Strand=Plus/Minus Query 120512 ACTCCTGTAAAACCTATGCTAGCAAACGTGTGTAAATCTAGTT-ATTATGCATTTAAAAA 120570 |||||| || ||| ||| | ||||| | || ||||| ||| | | ||||| ||||| Sbjct 269 ACTCCTATATCACCAATGTTGGCAAATGCTTGCAAATC-AGTAGACCAGGCATTCAAAAA 211 Query 120571 GTATAAAGATGGAATCTGTGCA--GAAATAAAGTACGATGGTGAACGAATTCAAATTCAT 120628 || | |||| | ||| || ||||||||||| |||||||| || | ||||| ||| Sbjct 210 GTGCCCAAATGG--TTTGTACACCGAAATAAAGTATGATGGTGAGCGCGTGCAAATACAT 153 Query 120629 AAAGACAATAATTTATATAAATATTTTAGTAGAAATCTAAAACCAGTTTTATTTCATAAA 120688 || | |||| || |||| ||||||| ||||| ||||||| ||| | ||| ||| Sbjct 152 AAGCAGGGTAATGAATTCAAATTTTTTAGTCGAAATTTAAAACCGGTTATGGATCACAAA 93 Query 120689 AT 120690 || Sbjct 92 AT 91 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479326515636800