Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq44371 87.8 1e-12 >seq44371 Length=3624 Score = 87.8 bits (96), Expect = 1e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 42919 TCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAA 42978 |||||||| | || ||||| | ||| || ||| |||| |||||||||||||| || ||| Sbjct 1131 TCCTTTTGAATGTTATAATCAGCCAAGGTTCGTCCGTCTTCCAATTGTTTGCCAGCGAAA 1190 Query 42979 ATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTG 43038 || || || || || || | || | ||||| || || ||| |||| || Sbjct 1191 ATTAAGCGTTGCTGGTCAGGTGGAATTCCTTCCTTGTCTTGAATCTTAGCTTTAACATGT 1250 Query 43039 CCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACA 43098 ||| || || || || || || | || || ||||| || || |||||||| ||| Sbjct 1251 TCAATAGTATCCGAAGGTTCAACCTCAAGTGTGATGGTTTTACCCGTAAGAGTTTTAACA 1310 Query 43099 AAAATTTGCATTT 43111 ||||||||||||| Sbjct 1311 AAAATTTGCATTT 1323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381058410987216