Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq44017 159 5e-34 >seq44017 Length=1387 Score = 159 bits (176), Expect = 5e-34 Identities = 282/406 (69%), Gaps = 5/406 (1%) Strand=Plus/Minus Query 70827 TTTCGTACGTAGATAGTACATGCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCAT 70886 ||| ||||||| ||| |||||||| ||||| ||||| |||| || |||||||| || Sbjct 405 TTTGGTACGTAAATAATACATGCCAGTTTTGAGACCCGCCTTCCAACCATAAAAATGTAT 346 Query 70887 ACTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATATTCATCGACTGACTTTGATC 70946 | ||||| ||| |||| | || || |||| || ||||| | ||| ||||||||||| Sbjct 345 AGATGTTAGCTTGCCATAGTTTGGTTCAGCTACATGTATATTAAACGATTGACTTTGATC 286 Query 70947 GATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAAT 71006 || || || || | || || ||||| || || | ||||| | |||||||| | Sbjct 285 AATAAACGCGCCACGATCAGCGGCCATCTTCATTGTAGTCTTCACCGATATTTCCCACAC 226 Query 71007 AGTTTTATAAA-CTCGCTTAATATCTTCTGG-AAGGTTTGTATTC--TGAATGGATCCAC 71062 ||| || |||| || | | || | || ||| | | || || | || || || |||| Sbjct 225 AGTCTTGTAAAGTTCACGT-ATTTTTTGTGGTATAGATTCAATACCTTGTATTGAACCAC 167 Query 71063 CATCTGCAATAATCCTATTTTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTC 71122 | | ||||| || |||| || ||||||| ||| || ||||| | | | | Sbjct 166 GACTGGTTATAATTTTAGTTTTCATTTCTTCATCCCACAAACCCAATTCGGTAAGATCGC 107 Query 71123 TAAGGAGATGAGGATTAACTACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATAT 71182 | | |||| ||||||| ||||||||||| || || | ||| | |||| | ||||| | Sbjct 106 GCAACAAATGATGATTAACAACTTGAAATTCGCCCGAAAGTACGCGACGATTATAAATGT 47 Query 71183 TACTGGTATACGGTTCCACTGACTCATTATTTCCCAAAATTTGAGC 71228 || ||||| ||||| | || |||||||| |||| |||||| || Sbjct 46 TAGAAGTATAAGGTTCAAAAGATTCATTATTGCCCATAATTTGTGC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 670577523603520