Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq44371 132 3e-26 seq25273 113 3e-20 >seq44371 Length=3624 Score = 132 bits (146), Expect = 3e-26 Identities = 161/214 (75%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATC-GCTTAGAATTCTCGCGTC 15210 || |||| ||| | || || || ||||| ||||| ||||| || || | || |||| Sbjct 1110 AATACTAGATGCAACGTAGATTCCTTTTGAATGTTATAATCAGCCAAGGTTCGTC-CGTC 1168 Query 15211 TTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTC 15270 ||| ||||||||||||||| | || || ||||| ||||| |||||||||||| ||||| Sbjct 1169 TTCCAATTGTTTGCCAGCGAAAATTAAGCGTTGCTGGTCAGGTGGAATTCCTTCCTTGTC 1228 Query 15271 ACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGG 15329 ||| || ||| || ||| ||| || ||||| | ||| || || | || |||| Sbjct 1229 TTGAATCTTAGCT-TTAACATGTTCAATAGTATCCGAAGGTTCAACCTCAAGTGTGATGG 1287 Query 15330 TTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 ||||||| || |||||||| |||||||||||||| Sbjct 1288 TTTTACCCGTAAGAGTTTTAACAAAAATTTGCAT 1321 >seq25273 Length=2210 Score = 113 bits (124), Expect = 3e-20 Identities = 164/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||| | ||| | | || || |||||||| || || ||||| |||||||| ||| Sbjct 1967 CCACCACGCAAGCGGAGGACCAAGTGAAGGGTAGACTCCTTTTGGATGTTGTAGTCGG-- 2024 Query 15197 AGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254 | || | || | ||||| ||||| ||||||||| | || ||||||||||| || | Sbjct 2025 ACAAGGCACGGCCATCTTCCAATTGCTTGCCAGCGAAAATTAAACGTTGTTGATCTGGGG 2084 Query 15255 GAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314 |||| |||||||| || ||||| |||||| | || || || || | || | Sbjct 2085 GAATGCCTTCTTTATCTTGGATTTTAGCCTTTACGTTCTCGATAGTGTCACATGGCTCGA 2144 Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 | || ||||| |||||||| || |||| ||| || || || ||||||||| Sbjct 2145 CTTCCAAGGTGATGGTTTTGCCAGTCAAAGTCTTCACGAAGATTTGCATA 2194 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || ||||| || || || || || |||||||| || ||| |||| | | |||| || Sbjct 1757 ACCAAATGGAGTGTCGATTCCTTCTGTATGTTATAGTCGGCTAGAGTACGTCCGTCCTCC 1816 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 | || |||||||| | || |||||||| || || ||||| || || || || Sbjct 1817 AGCTGCTTGCCAGCAAAGATTAAACGTTGCTGATCTGGAGGAATACCCTCCTTATCTTGG 1876 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 || ||| ||||||| |||| || |||||| || || ||||| || || || || Sbjct 1877 ATCTTGGCCTTTACATTTTCAATAGTATCGGATGGCTCAACTTCTAAAGTGATAGTCTTG 1936 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 ||||||| || || ||||||||||||||| Sbjct 1937 CCTGTCAATGTCTTGACAAAAATTTGCATA 1966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361883669921832