Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_004914.3 Length=62706 Score E Sequences producing significant alignments: (Bits) Value seq66733 82.4 3e-11 >seq66733 Length=2293 Score = 82.4 bits (90), Expect = 3e-11 Identities = 65/77 (84%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 52499 GGCCCTTTAGCTCAGT-GGTGAGAGCGAGCGACTCATAATCGCCAGGTCGCTGGTTCAAA 52557 ||||| |||||||| ||| |||||| | ||||||||||||| |||||||||||||| Sbjct 552 GGCCCCATAGCTCAGACGGTTAGAGCGTGTGACTCATAATCGCTTGGTCGCTGGTTCAAG 611 Query 52558 TCCAGCAAGGGCCACCA 52574 |||||| ||||||||| Sbjct 612 TCCAGCTGGGGCCACCA 628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200370768441624