Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_004928.1 Length=167560 Score E Sequences producing significant alignments: (Bits) Value seq66944 212 7e-50 >seq66944 Length=5658 Score = 212 bits (234), Expect = 7e-50 Identities = 382/554 (69%), Gaps = 21/554 (4%) Strand=Plus/Plus Query 142075 AATTTATCTTGATCTTCAAAGAATGAGTAATATAGTTCGCCTGACATTTCGTGAGGG-CT 142133 |||| || ||||| ||||||||| | ||||| |||| || || ||| || || Sbjct 1416 AATTCTTCCTGATCAGCAAAGAATGCATCGTATAGA---CCTGGCACATC-TGACGGACT 1471 Query 142134 AAATAAAGTAATATAATCATTTTTACCA-----AGGCGTTCCATCATGAGGTCATTAATC 142188 ||||| |||||||| | || || ||||| | ||| || | ||| | Sbjct 1472 AAATAGAGTAATATC-----TCTTCCCTGGAGTAGGCGCTGATACATCAGTTTATTCAAT 1526 Query 142189 TGAATTCCGTAGTCCATATGTCGAATACGGTTTTCATCCACGCCTTTGTTATTTTTCAGA 142248 |||| || |||||||| || |||| |||||| || || ||||| |||||| |||| Sbjct 1527 TGAACACCATAGTCCATGTGACGAACACGGTTATCTTCTACGCCACGGTTATTCTTCAAG 1586 Query 142249 ACTAATAGGTTCTCTACTTCTAAGTGCCACATTGGATAATACGCTGTAGCAGCACCACCA 142308 || | || | || ||||| |||||||| |||||||| | ||| ||||||||||| Sbjct 1587 ACCAGTAAACTTTCCACTTCCAAGTGCCATATTGGATAGAATAGTGTTGCAGCACCACCG 1646 Query 142309 CGAATACCACCTTGAGAACAAGATTTTACTGCAGTTTGGAAATGTTTCCAGAATGGAATA 142368 || | ||||||||||||||||||||| ||||| || || || ||||| | ||||| ||| Sbjct 1647 CGTACACCACCTTGAGAACAAGATTTAACTGCGGTCTGAAAGTGTTTATAAAATGGGATA 1706 Query 142369 ACACCCGTATGTCGAACTTCACCCATACCGATCTTAGAACCTTC---TGCACGAAGCATA 142425 ||||||||| | |||| || || ||| |||| | | ||||||| | Sbjct 1707 CAACCCGTATGAAAAGCTTCGCCGTCACGTATC---GAACTTCCCAAGGCACGAATTCGA 1763 Query 142426 CCAACGTTGATACCGATACCAGCTCGTTTAGAAATATATTCAATAATTGATGCTGAAGTT 142485 || | || || || |||||||| |||| |||| ||||| | ||||| ||||||| Sbjct 1764 CCGGCATTAATGCCAATACCAGCCCGTTGGGAAACATATTTCACAATTGCACTTGAAGTT 1823 Query 142486 TTGTTAATAGATTTTAACGAATCACCGGCTTCAATAACTACACAACTAGAGAACTGGCGA 142545 ||||| || | | |||||||| ||||| | ||| || | |||||||||| Sbjct 1824 GCATTAATCGAATCGAGGCTATCACCGGACTCAATTAGTACGCAGGAACTGAACTGGCGA 1883 Query 142546 GTTGGAGTACGAGCACCTGCCATAATTGGGGTTGGCAATGAAACTTGATGAGTAGAAACG 142605 | || || || |||| | ||| ||||| || ||||| |||| || | ||| |||| Sbjct 1884 ATAGGTGTGCGTACACCGGACATGATTGGTGTGGGCAAAGAAATTTTAAAAGTTGAAATA 1943 Query 142606 GCATCATAAAAACG 142619 ||||| || || || Sbjct 1944 GCATCGTAGAAGCG 1957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 535615368038400