Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_005066.1 Length=164018 Score E Sequences producing significant alignments: (Bits) Value seq66944 136 4e-27 >seq66944 Length=5658 Score = 136 bits (150), Expect = 4e-27 Identities = 320/478 (67%), Gaps = 15/478 (3%) Strand=Plus/Plus Query 135735 ACATCTG---GACTAAACAGAGTAATGTAA--TCCCGTTTAAGGAATCGCTCTACCATCA 135789 ||||||| ||||||| |||||||| | |||| | || | |||| ||||| Sbjct 1458 ACATCTGACGGACTAAATAGAGTAATATCTCTTCCC--TGGAGTAGGCGCTGATACATCA 1515 Query 135790 GGTTATTAATCTGTACGCCGTAATCAAGATGACGAATGCGGTTATCTTCCACCCCCTTAT 135849 | ||||| | || || || || || | ||||||| ||||||||||| || || | Sbjct 1516 GTTTATTCAATTGAACACCATAGTCCATGTGACGAACACGGTTATCTTCTACGCCACGGT 1575 Query 135850 TGTTCTTTAACACAATCAGACTTTCAAACTCTAAATGCCACATTGGGTAATAGAGAGTCG 135909 | ||||| || || | | |||||| | || || ||||| ||||| || | || || | Sbjct 1576 TATTCTTCAAGACCAGTAAACTTTCCACTTCCAAGTGCCATATTGGATAGAATAGTGTTG 1635 Query 135910 CCGCCCCGCCACGAATACCGCCTTGTGAGCATGACTTAACGGCAGTCTGAAAATGTTTCC 135969 | || || || || | ||| ||||| || || || ||||| || |||||||| ||||| Sbjct 1636 CAGCACCACCGCGTACACCACCTTGAGAACAAGATTTAACTGCGGTCTGAAAGTGTTTAT 1695 Query 135970 AGAATGGGATAACGCCAGTATGACGAACTTCACCATGCCCGATCTTAGATCCTTCCGCGC 136029 | ||||||||| || |||||| | |||| || | | ||| | ||| || | Sbjct 1696 AAAATGGGATACAACCCGTATGAAAAGCTTCGCCGTCACGTATCGAACTTCCCAAGGCAC 1755 Query 136030 GAATCATACCAGCGTTGATACCGATGCCAGCACGCTTGCTAATATACTTGATGATTGCAT 136089 |||| ||| || || || || || ||||| || | | || ||| || | |||||| Sbjct 1756 GAATTCGACCGGCATTAATGCCAATACCAGCCCGTTGGGAAACATATTTCACAATTGCAC 1815 Query 136090 TTGCTGTTTCGTTGATGCCCTGCAATGAGTC-ATCAC---TTTCAATCACCACGCACGAA 136145 ||| ||| | || || | | ||| | ||||| ||||| | ||||| ||| Sbjct 1816 TTGAAGTTGCATTAAT----CGAATCGAGGCTATCACCGGACTCAATTAGTACGCAGGAA 1871 Query 136146 CTAAATTGTCGTGTTGGAGTACGCACACCCGCCATAATCGGAGTAGGCAGAGAGATTT 136203 || || || || | || || || ||||| | ||| || || || |||| ||| |||| Sbjct 1872 CTGAACTGGCGAATAGGTGTGCGTACACCGGACATGATTGGTGTGGGCAAAGAAATTT 1929 Score = 84.2 bits (92), Expect = 2e-11 Identities = 117/162 (72%), Gaps = 4/162 (2%) Strand=Plus/Plus Query 134874 CCTTCTTTCGATCCTTTAA--CCGATACAATCCCGCGAGGCGGTTCAATACCATTTGTGC 134931 || ||||| ||| |||||| | |||| | || ||||| |||||||||||||| || Sbjct 591 CCATCTTTTGATGCTTTAATGCTGATATGA--CCACGAGGTGGTTCAATACCATTGGTCG 648 Query 134932 TGTTAGACACCTGAGAGGACGACTCACAAGGCATCAGCGCCGACAGTGTACTGTTACGAA 134991 |||||| | ||| || || | ||| |||||||||| || || || ||| |||||| | Sbjct 649 CGTTAGATATCTGCGATGATGTTTCAGAAGGCATCAGTGCAGATAGAGTAGAGTTACGTA 708 Query 134992 TGCCATATTTTTTCAGGTCTTTGCGCAGTTCTTCCCAATCCA 135033 || || ||| | || ||| ||||||||||| |||| Sbjct 709 GACCGTAGACTTTAATTGATTCGCGTAGTTCTTCCCAGTCCA 750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 524290453797760