Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_005083.2 Length=244834 Score E Sequences producing significant alignments: (Bits) Value seq66944 141 1e-28 >seq66944 Length=5658 Score = 141 bits (156), Expect = 1e-28 Identities = 196/272 (72%), Gaps = 7/272 (3%) Strand=Plus/Minus Query 147283 AACGTGCGGGTATTGGCGTAAACGGTGGTGCAATTCGAGCAGAGGG---TTCGGTTGTAC 147339 |||| || ||||||||| | || | ||| |||||| || ||| |||| | || Sbjct 1791 AACGGGCTGGTATTGGCATTAATGCCGGTCGAATTCGTGCCTTGGGAAGTTCGAT---AC 1735 Query 147340 GTGCGGGTGAAATTCGTCACACTGGCGTAATTCCTTTCTGGAAACACTTTCAGACTGCGG 147399 ||| || ||| | ||| || || || || || | |||||||||||||| || | Sbjct 1734 GTGACGGCGAAGCTTTTCATACGGGTTGTATCCCATTTTATAAACACTTTCAGACCGCAG 1675 Query 147400 TTAAATCGTGTTCTCAAGGTGGTGTACGTGGCGGTGCTGCGACTCTGACTTACCCGATCT 147459 ||||||| |||||||||||||||||||| || |||||||| || || || || || | Sbjct 1674 TTAAATCTTGTTCTCAAGGTGGTGTACGCGGTGGTGCTGCAACACTATTCTATCCAATAT 1615 Query 147460 GGCACTTAGAAGTAGAAAAGCTTCTTGTTCTGAAGAACAACAAAGGTGTTGAAGAGAACC 147519 ||||||| ||||| |||| | || || ||||||| ||| || || ||||| |||| Sbjct 1614 GGCACTTGGAAGTGGAAAGTTTACTGGTCTTGAAGAATAACCGTGGCGTAGAAGATAACC 1555 Query 147520 GTATTCGTCATCTTGACTACAGCGTATCAATT 147551 || ||||||| | ||||| | || |||||| Sbjct 1554 GTGTTCGTCACATGGACTATGGTGT-TCAATT 1524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 782685222084480