Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq25273 141 2e-28 >seq25273 Length=2210 Score = 141 bits (156), Expect = 2e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || | ||| | ||| ||||| ||||| || |||||||| | |||||| | ||||| Sbjct 1753 AAGCACCAAATGGAGTGTCGATTCCTTCTGTATGTTATAGTCGGCTAGAGTACGTCCGTC 1812 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || || |||||||| |||| | || ||||| ||||| || || || ||||| Sbjct 1813 CTCCAGCTGCTTGCCAGCAAAGATTAAACGTTGCTGATCTGGAGGAATACCCTCCTTATC 1872 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 || ||||| || ||||||||||| | |||||| || || || |||| || ||||| Sbjct 1873 TTGGATCTTGGCCTTTACATTTTCAATAGTATCGGATGGCTCAACTTCTAAAGTGATAGT 1932 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| || || | ||| || ||||| || ||||| Sbjct 1933 CTTGCCTGTCAATGTCTTGACAAAAATTTGCAT 1965 Score = 86.0 bits (94), Expect = 1e-11 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||| || || || || || ||||| || | | | || ||||| | ||| || ||| Sbjct 1997 GTAGACTCCTTTTGGATGTTGTAGTCGGACAAGGCACGGCCATCTTCCAATTGCTTGCCA 2056 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || ||||||| | |||||||| || || || ||||||||||| || || || || ||| Sbjct 2057 GCGAAAATTAAACGTTGTTGATCTGGGGGAATGCCTTCTTTATCTTGGATTTTAGCCTTT 2116 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | || || | || || || || | || || || || ||||| | || Sbjct 2117 ACGTTCTCGATAGTGTCACATGGCTCGACTTCCAAGGTGATGGTTTTGCCAGTCAAAGTC 2176 Query 104543 TTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 2177 TTCACGAAGATTTGCAT 2193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1150410704546016