Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_005856.1 Length=94800 Score E Sequences producing significant alignments: (Bits) Value seq66922 540 6e-149 seq66707 134 8e-27 >seq66922 Length=4115 Score = 540 bits (598), Expect = 6e-149 Identities = 910/1306 (70%), Gaps = 16/1306 (1%) Strand=Plus/Plus Query 71337 GCAGAACAAGCTGTACTTGGTGGCTTAATGCTTGATAACTGCCGCTGGGATGAAGTTGCA 71396 || ||||| | || | ||||| |||||| | |||||| || |||||| | ||| | Sbjct 1211 GCCGAACAGTCAGTGTTGGGTGGTTTAATGTTAGATAACGAACGATGGGATAATGTTTCT 1270 Query 71397 GATCGTATAGTTGCTGATGATTTTTATACCAGTGCTCATCGTGAAATTTTCAGTGAGATG 71456 || || | || || | ||||||| | | | || ||| || |||| |||||| Sbjct 1271 GAGCGCGTGGTAGCAAAAGATTTTTTCAAGCGATCACACCGTATGATCTTCACGGAGATG 1330 Query 71457 GAGAGGTTATTAAGTCATGGCAAACCGATTGATTTGATAACACTTGCTGAAGCACTTGAA 71516 |||| ||| | || || |||||||||||| || ||||| ||||| | | ||| Sbjct 1331 CAGAGATTACTGGAGCAGGGTAAACCGATTGATCCAATTACACTCTCTGAATCGATGGAA 1390 Query 71517 CAGAACGGTAAATTA-GAACGCGCCGGTGGTTTTGCGTACCTTGCGGAGATGTCAAAGAA 71575 || || | || | | | | ||||| ||||| || || || ||| | ||||| || Sbjct 1391 ACTAAAGGCGAGCTAAGTATG-GTTGGTGGCTTTGCCTATCTCGCTGAGCTATCAAAAAA 1449 Query 71576 CACGCCCAGCTCGGCAAATATTTGTGCTTATGCGGATATCGTTCGTGAACGCGCGGTTGT 71635 || || ||| |||| ||||| |||||||||| ||||| ||||||||||| || ||||| Sbjct 1450 TACTCCAAGCGCGGCTAATATAGGTGCTTATGCAGATATAGTTCGTGAACGAGCAGTTGT 1509 Query 71636 TCGTGAAATGATTTCCGTCGCAAATGAAATAGCCGAAGCTGGATATGCGCAGGATGGCAG 71695 ||||| |||||| | || ||||||||||| || || || || || | | | || | Sbjct 1510 ACGTGAGATGATTACTGTAGCAAATGAAATCGCAGATGCCGGTTACGATCCACAAGGACG 1569 Query 71696 GGGCAGCAATGAATTGCTGGATATGGCCGAGCGCCGCGTTTTTGAAATAGCTGAAAAACG 71755 ||||| | || ||||| ||| | || || ||||| ||| | || || ||| | | Sbjct 1570 TAGCAGCGAAGATTTGCTCGATCTTGCAGAATCACGCGTATTTCAGATCGCGGAACATAG 1629 Query 71756 AC--AAAAGAGCGGTAGTGGTCCAAAAGATATCGC-CAGCATTCTCGATGCAACGGTATC 71812 | || | ||| | || | || ||| ||| | ||| || || || |||| | || Sbjct 1630 AGCTAATAAAGCAGCAG--GCCCTAAAAGTATTGATCAG-ATCCTTGAAACAACTATTTC 1686 Query 71813 TCGCATAGAAGAGTTGTTTCAGCGACCACATGATGGTGTAACGGGGCTTGATACGGGATT 71872 ||||| ||| | | | || ||||||||||||||| || || || ||||| |||| Sbjct 1687 ACGCATTGAATTGCTATACCAAACACCACATGATGGTGTCACAGGTCTCGATACTGGATA 1746 Query 71873 TACCGATCTCAATAAGAAGACGGCAGGGCTTCAGCCGTCCGATCTCATCATTGTCGCCGC 71932 | ||| | ||||| ||||| || || || |||| || ||| | || ||||| || || Sbjct 1747 TCAGGATTTGAATAAAAAGACTGCTGGCCTACAGCGCTCAGATTTAATTATTGTTGCTGC 1806 Query 71933 CCGCCCATCTATGGGGAAGACCACGTTTGCGATGAATCTCGTCGAAAATGCCGCAGTTCG 71992 || || || ||||| || || || ||||| |||||||| |||||||| || | | Sbjct 1807 TCGTCCGTCGATGGGCAAAACTACTTTTGCCATGAATCTATGTGAAAATGCTGCTATG-G 1865 Query 71993 TA-ACGATAAGCCCGTATTGGTTTTTAGCCTTGAGATGCCGAGCCACCAGCTGATGATGC 72051 || | || || || ||| | |||||||| | |||||||| | | || | ||||||| Sbjct 1866 TACAGGAAAAACCAGTACTAATTTTTAGCTTAGAGATGCCTGGTGAACAAATAATGATGC 1925 Query 72052 GCTCACTGGCTTCTCTTGCACGCGTTGATCAGACTCGTATTCGGACAGGGCAACTTAACG 72111 | || |||||| | | || ||||||||||| |||||||| || || || ||| | | Sbjct 1926 GTATGCTAGCTTCTTTATCTCGTGTTGATCAGACGCGTATTCGAACTGGTCAGCTTGATG 1985 Query 72112 ACGAGGATTGGGCGCGGGTTTCTGGCGCAATGGGTATTCTGTTGGACAAGCAGAATATTT 72171 | ||||| ||||| || | ||| | | |||||| | | || || || |||| || | Sbjct 1986 ATGAGGACTGGGCACGTATCTCTAGTACTATGGGTCTCTTATTAGAGAAAAAGAACATGT 2045 Query 72172 TTATTGATGACTCAAGCGCCCTGACGCCGACAGAGCTACGTTCCCGCGCTCGTCGTGTTT 72231 ||||||||||||| | || || || || ||| | ||| | || | || || || | Sbjct 2046 TTATTGATGACTCCTCTGTTCTAACACCAACTGAGATGCGTGCTCGTTCGCGGCGAGTCT 2105 Query 72232 ATAAAGAAAATGGTGGTTTGAGCATGATTATGATCGACTACCTGCAACTTATGCGCGTCC 72291 || |||||||||| || |||||||||||||||| || || | ||||| || | Sbjct 2106 TCCGTGAGCATGGTGGTTTAAGTCTGATTATGATCGACTATCTTCAGTTGATGCGTGTTC 2165 Query 72292 CCGAGCTGCAAGATAACCGAACGCTGGAAATTGCCGAGATTTCTCGCTCACTGAAGGCGT 72351 | | ||| ||||| || || || || || || || ||||| ||||| |||||||| Sbjct 2166 CAGCACTGTCTGATAATCGTACACTAGAGATCGCTGAAATTTCACGCTCGCTGAAGGCAC 2225 Query 72352 TGGCGAAGGAATTACAAGTACCGGTGGTGGCATTGTCACAACTTAATCGATCGCTTGAAC 72411 ||||||| ||||| || || ||||| || || || ||||| |||||||| ||||| |||| Sbjct 2226 TGGCGAAAGAATTGCAGGTGCCGGTAGTAGCGTTATCACAGCTTAATCGCTCGCTAGAAC 2285 Query 72412 AGCGTGCGGACAAACGACCGGTAAATTCAGATTTACGTGAATCAGGAGCAATTGAGCAGG 72471 |||| || || || || ||||| || || || ||||||||||| || | |||||||| | Sbjct 2286 AGCGAGCAGATAAGCGCCCGGTTAACTCTGACTTACGTGAATCTGGTTCTATTGAGCAAG 2345 Query 72472 ACGCAGACCTGATTATGTTTCTGTATCGCGACGAAGTTTATCACCCGGATAGCGAAATGA 72531 | || || | || |||||| | |||||||| ||||| || || |||| | ||| Sbjct 2346 ATGCCGATTTAATCATGTTTATCTATCGCGATGAAGTCTACCATGAAAATAGTAATTTGA 2405 Query 72532 AGGGCATTGCCGAGGTAATTATC---GGAAAGCAACGAAATGGCCCAATTGGCACGGTGA 72588 | || ||||||| ||||||| || || || || || ||||| ||||| || || Sbjct 2406 AAGGAGTTGCCGA---AATTATCCTAGGCAAACAGCGTAACGGCCCCATTGGGACAGTAC 2462 Query 72589 GATTGGCTTTTAACGGCCAATACTCACGGTTTGATAACTATGCCGG 72634 | ||| | |||||||| || | || || |||||||| || || || Sbjct 2463 GCTTGACCTTTAACGGTCAGTGGTCGCGTTTTGATAATTACGCTGG 2508 >seq66707 Length=2212 Score = 134 bits (148), Expect = 8e-27 Identities = 224/324 (69%), Gaps = 0/324 (0%) Strand=Plus/Minus Query 21063 GGTGTAAACAAAGTCATCCTGATTGGTACCCTGGGGCAAGACCCGGAGATCAGGTATATA 21122 ||| |||||||||| || | |||| | || || |||||||| || | | || || Sbjct 331 GGTATAAACAAAGTAATTTTAGTTGGAAATCTTGGTCAAGACCCAGAAGTTCGCTACATG 272 Query 21123 CCAAATGGCGGCGCGGTCGGAAGACTCAGCATCGCAACGAATGAATCATGGCGCGACAAG 21182 || |||||||| || || | | | | | || || |||| ||||| |||||| Sbjct 271 CCGAATGGCGGTGCCGTTGCTAACATAACTTTAGCTACTTCTGAAAGTTGGCGTGACAAG 212 Query 21183 CAAACGGGCCAACAGAAAGAGCAAACAGAATGGCATAAAGTCGTTTTGTTCGGAAAACTT 21242 ||||| || || |||||| |||| |||||||| | |||||||| || || || Sbjct 211 CAAACCGGAGAAACTAAAGAGAAAACTGAATGGCACCGTATTGTTTTGTTTGGCAAGCTA 152 Query 21243 GCTGAAATTGCGAGTGAGTATTTACGAAAAGGTTCTCAGGTCTACATCGAAGGGAAACTT 21302 |||||| | || ||||||| | || ||||| ||||| || ||||| ||||| | ||| Sbjct 151 GCTGAAGTCGCTGGTGAGTACCTTCGCAAAGGATCTCAAGTTTACATTGAAGGCACACTA 92 Query 21303 AAAACCCGTAAGTGGACAGATGACGCCGGTGTAGAACGTTACACGACGGAAATTATCGTC 21362 |||| ||||| ||||| || | || ||||| ||| ||||| || ||| | | || Sbjct 91 CAAACTCGTAAATGGACTGACCAGGCAGGTGTTGAAAAATACACCACCGAAGTAGTAGTA 32 Query 21363 AGCCAGGGCGGCACCATGCAAATG 21386 | | || ||||| ||||| ||| Sbjct 31 AACATTGGAGGCACTATGCAGATG 8 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 302987766899592